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Name : Bamb_4843 (Bamb_4843) Accession : YP_776726.1 Strain : Genome accession: NC_008391 Putative virulence/resistance : Unknown Product : sigma-54 dependent trancsriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 1841241 - 1843223 bp Length : 1983 bp Strand : + Note : KEGG: bur:Bcep18194_B0140 sigma54 specific transcriptional regulator with PAS sensor, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; Prop DNA sequence : ATGGACCTCTCCTCGACCAAGCCCGTCGGCCCGGCCGACCGCACGGTACGCCCGCGCATCTGGGCGATGGGCATCAGCCG CCTGCGCGACCTGTTTCGCGAGATCGCCGGTGAATTCGACGAACGCGCCGACGTGCGCATCGTCACGCGGGCCTACGAAG ACGCGCTGAGCGCGATCGCGGAAGCCGGCACCGCGCGGCCCGACGTGATCGTCGCGGCCGGCTCGAACGGCGGCTTCCTG AAAACGCGTGCGCAGGTGCCGGTGGTAGTCGTGTCGCCGACCGGCTTCGACGTGATGCAGGCGCTCGCGCGCGCACGGCG CGACGCGTCGCGGATTGCCCTCGTCAGCGCCGGCGAGACGCCGCCGGAGGTGCGCCGCTTCGTCGCCGCCTACGGCCTCG ACGTGCAGTTTGCGTCATATCAGTCCGCTCAGGAAGCGGAAGCCTGCGTGCACGACCTGCACGACCGCGGCATCGAGACG ATCGTCGGCCCCGGCCTCGTCACCGATCTCGCGGCGAGTGCCGGCATGGGCGCGGTGTTCCTGTATTCGCACGCGTCGGT GCGCAAGGCGGTCGAAACGGCACTCGAAGTCGCGTACGCGACGCACGCCGAGGCGTTTCGCCGTCAGCGCCTCGACAACC TGTTGCAGCACCTGCGCGACGGCGTGGTCGCGCTCGACGCGCGCGGTCACGTCGAGGCGATCAACGAGCGGCTCGCGTCG GCGCTCGGGGTCGAACCGGCGGCGGCCGTCGGCCGCGCGCTCGTCGACCTGCGGCCCGAGCTGCGCACGCTGCGCGGCGA GGATGGCGACGCGCTCGCGACGGTGCGCGGCGTGCGCTACGTCGTGCATCGCGGGCCGCTCGTCGATCGCGGCGTCACGT CGGGCAGCGTGCTGACCTTCCAGGAATCGCGCGCGGTCGAACGGCTCGACCGCGCGCTGCGTTCGCAGCCGAATACGCAG CAGTTCGCGGCGCGCTACGCACTCGACGACGTGGTCGGCGCGTCCGCGCCGATGGCGCGCGTGCGCGACCTCGTGCGCCG CTACGCGAAATCCGACGCGACCGTGCTCGTGCTCGGCGAGAGCGGCACCGGCAAGGAGATGATCGCGCAGAGCCTGCACG CGCTGTCCGTGCGGCGCAGCTATCCGTTCGTCGCGATCAACTGCGGCGCGTTTCCGGAAGCGCTGCTCGAGAGCGAGCTG TTCGGTTATGAGGAAGGCGCGTTCACCGGCGCCCGGCGCGGCGGCAAGACCGGGCTGTTCGAGGCCGCGCACCGCGGCAC GCTGTTTCTCGACGAGATCGGCGAGATGCCGCCGTCGCTGCAAAGCCGACTGCTGCGCGTGCTGCAGGAGCGTGAGGTGA TCCGCCTCGGTTCGACCGAGCCGATCCGCATCGACGTGCGCGTGATCGCCGCGACGCACCGGCCGCTGCTCGCGGCCGTC GAAGCCGGCACGTTCCGCGCGGACCTGTATTACCGGCTCAACATCCTGAACATCGGCCTGCCGCCGCTGCGCGAGCGCGC GGCCGACATTCCGGCGCTCGCGGCCACGCTGCTCGTGCAGGCCGCGCGGCGCGAGCCGCGGCTGGCCGAACGCGTGCGCG AGGTCGACGACGCGATGCGCGTGCTCGGCGCGACGCAGGCGACGCTCGCCCGCTACCGCTGGCCCGGCAACGTGCGGGAA TTGCAGAACGTGGTCGAGCGGATCGCGGTGGAACTGGCCGAGGAAGTCGACGAGCAGGATCCGGGCGCCCCGTGCGCCGC GCTCGCGCCCGACGCGCTGCAGGCGATCGCGCCGGAGTTGTTCGCGACACCGCCCGAGGCCGCCGATCCCGACGACGCGC AGACACTGCAAGCACGCCGCCGCCGCGCGGAAGCCGACGAGATCCGCGCGGTGCTCGATGCGTGCGGCGGCGACCGCGAT CGCGCGTGTGCGATGCTGGGCATCAGCAAGACGACGCTGTGGCGGAAGCTTTCGGCGAAGTAG Protein sequence : MDLSSTKPVGPADRTVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALSAIAEAGTARPDVIVAAGSNGGFL KTRAQVPVVVVSPTGFDVMQALARARRDASRIALVSAGETPPEVRRFVAAYGLDVQFASYQSAQEAEACVHDLHDRGIET IVGPGLVTDLAASAGMGAVFLYSHASVRKAVETALEVAYATHAEAFRRQRLDNLLQHLRDGVVALDARGHVEAINERLAS ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRSQPNTQ QFAARYALDDVVGASAPMARVRDLVRRYAKSDATVLVLGESGTGKEMIAQSLHALSVRRSYPFVAINCGAFPEALLESEL FGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV EAGTFRADLYYRLNILNIGLPPLRERAADIPALAATLLVQAARREPRLAERVREVDDAMRVLGATQATLARYRWPGNVRE LQNVVERIAVELAEEVDEQDPGAPCAALAPDALQAIAPELFATPPEAADPDDAQTLQARRRRAEADEIRAVLDACGGDRD RACAMLGISKTTLWRKLSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 7e-100 | 41 |
