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Name : Bamb_4345 (Bamb_4345) Accession : YP_776231.1 Strain : Genome accession: NC_008391 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1271806 - 1274145 bp Length : 2340 bp Strand : + Note : PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bur:Bcep18194_B0779 lysine decarboxylase DNA sequence : ATGACCGCTACCTTGACCCAACCGGCGTTTCGCCGCCTCGGCATGAAGGCGCTGCTCGTGCAGCACGACATCGACGAACG CACGGCCACCGGCCGCGCAGCCACCGCCCTCGCCGAAGAATTGCGCGCCCGGCTCGTCGACGTCGTGATCGCGACGTCCG CCGAAGACGCGCGCGCGGTGGTCGACGCCGATCCCGCGATCCAGTGCCTGCTGCTCAACTGGGAGCTCGGCAACGATCCC GAGCATGCGCCCGCGCGGGCCGTGCTCGACGCGATGCGCGCACGCAATGCGACGGTGCCGGTGTTCCTGCTCGCGAGCCG CGCGAGCGCGGCCGCGATTCCCGTCGACGCGATGCGCAAGGCCGACGACTTCATCTGGATGCTGGAGGACACCACCGCGT TCATCGGCGGGCGGATCGTCGCCGCGATCGAACGCTATCGCGAGACCGTGCTGCCGCCGATGTTCCGCGCACTCGCGCAG TTCTCGCGCGTGTACGAATACTCGTGGCACACGCCGGGCCACACAGGCGGCACCGCATTCCTGAAATCGCCGGTCGGCCG CGCGTACTTCGAATTCTTCGGCGAAGCGCTGTTCCGCTCGGACCTGTCGATCTCGGTCGGCGAACTCGGCTCGCTGCTCG ACCACTCGGGCCCCATCGGCGAAAGCGAACGCTACGCCGCGCGCGTGTTCGGCGCGCACCGCACGTATCACGTGACGAAC GGCTCGTCGATGTCGAACCGCGTGATCCTGATGGGGAGCGTCACGCGCAATCAGGTCGCGCTGTGCGACCGCAACTGCCA CAAGTCGGCCGAGCATGCGATGACGATGTCCGGCGCGATTCCGACCTACCTGATCCCGTCGCGCAACCATTACGGGATCA TCGGGCCGATCATGCCGGAACGGCTCACGGCCGCCGCCGTGCGGCTCGCGGTCGACGCGAATCCGCTCGTGCGCGGCCGC GACGGCATCGATCCGACGCCCGTGCATGCGCTGATCACGAACTCGACCTACGACGGCCTCTGCTACAACGTCACGCGCGT CGAGGAACTGCTCGGCCAGAGCGTCGACCGGCTGCATTTCGACGAAGCCTGGTACGGCTATGCGCGCTTCAACCCGATCT ACCGCGACCGTCACGCGATGCACGGCGATCCGTCGCAGCACGACGCGAGCAAGCCGACCGTGTTCGCGACGCAATCGACG CACAAGCTGCTCGCCGCGCTGTCGCAGGCATCGTTCATCCATGTCCGCAACGGCCGCAACCCGATCGAGCATGCACGCTT CAACGAGGCGTACATGATGCACGCGTCGACGTCGCCGAACTACGCGATCATCGCGTCGAACGACGTGAGTGCCGCGATGA TGGACGGCCCCGGCGGCGAGGCGCTGACGACCGACGCGATCCGCGAGGCCGTGTCGTTTCGCCGGATGCTCGCGCGACTG CACGCGGAATGCGAGGAGAACGACGACTGGTTCTTCAACGGCTGGCAGCCGGACACCGTGGTCGACCGCAAGACGGGCCG CCGCGTGCGCTTCCATGAAGCGGACGAAACGCTGCTCGCCACCGATCCGTCGTGCTGGGTGCTGCATCCGGGCGACACGT GGCACGGCTTCGGCGAGATCGAGGACGACTACTGCATGCTCGACCCGATCAAGGTATCGATCGTCACGCCGGGCGTCGCG CCGCACGGCGGCCTGATGCCGGTCGGCATTCCGGCATCGGTCGTCACCGCGTATCTGGACCGGCACGGGATCGTCGTCGA GAAGACGACCGACTTCACGATCCTGTTCCTATTCTCGCTCGGCGTGACGAAGGGCAAGTGGGGCACGCTCGTCAACACGC TGCTCGACTTCAAGCGCGACTACGACGCGAACGCGCCGCTCGAACAGGCGCTGCCGGACCTCGTGGCGCGTTATCCGGAC CGCTACGGCAAGCTCGGCCTGCGCGAGCTGTGCGACCTGATGTTCAGCGCAATGAGCGACCTGAAGACGACCGAGATGAT GTCGCGCGGCTTCTCGACGCTGCCGCAGCCCGACTTCAGCCCGGCCGAGGCGTTCGAGCATCTCGTGCACAACGACATCG AGATGCTGGAGCTGTCGGAGATGGCGGGCCGCACCGTCGCGACGGGCGTCGTGCCCTATCCGCCCGGCATTCCGCTGCTG ATGCCCGGCGAGAACGCGGGGCCGGCCGACGGGCCGCTGCTCGGCTACCTGAAGGCGCTCGAGCAATTCGACCTGCGCTT CCCCGGCTTCACGCACGATACGCACGGCGTCGAAGTCGAGGACGGCGTGTACCGGATCGCCTGCATCCGGCAAGTCGATC GCAAGACCAACACGCGCTGA Protein sequence : MTATLTQPAFRRLGMKALLVQHDIDERTATGRAATALAEELRARLVDVVIATSAEDARAVVDADPAIQCLLLNWELGNDP EHAPARAVLDAMRARNATVPVFLLASRASAAAIPVDAMRKADDFIWMLEDTTAFIGGRIVAAIERYRETVLPPMFRALAQ FSRVYEYSWHTPGHTGGTAFLKSPVGRAYFEFFGEALFRSDLSISVGELGSLLDHSGPIGESERYAARVFGAHRTYHVTN GSSMSNRVILMGSVTRNQVALCDRNCHKSAEHAMTMSGAIPTYLIPSRNHYGIIGPIMPERLTAAAVRLAVDANPLVRGR DGIDPTPVHALITNSTYDGLCYNVTRVEELLGQSVDRLHFDEAWYGYARFNPIYRDRHAMHGDPSQHDASKPTVFATQST HKLLAALSQASFIHVRNGRNPIEHARFNEAYMMHASTSPNYAIIASNDVSAAMMDGPGGEALTTDAIREAVSFRRMLARL HAECEENDDWFFNGWQPDTVVDRKTGRRVRFHEADETLLATDPSCWVLHPGDTWHGFGEIEDDYCMLDPIKVSIVTPGVA PHGGLMPVGIPASVVTAYLDRHGIVVEKTTDFTILFLFSLGVTKGKWGTLVNTLLDFKRDYDANAPLEQALPDLVARYPD RYGKLGLRELCDLMFSAMSDLKTTEMMSRGFSTLPQPDFSPAEAFEHLVHNDIEMLELSEMAGRTVATGVVPYPPGIPLL MPGENAGPADGPLLGYLKALEQFDLRFPGFTHDTHGVEVEDGVYRIACIRQVDRKTNTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 7e-124 | 41 |
