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Name : Bamb_4230 (Bamb_4230) Accession : YP_776117.1 Strain : Genome accession: NC_008391 Putative virulence/resistance : Virulence Product : type III secretion FHIPEP protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 1152320 - 1154569 bp Length : 2250 bp Strand : - Note : PFAM: type III secretion FHIPEP protein; KEGG: rso:RSp0863 hrp conserved hrcV transmembrane protein DNA sequence : ATGACGGCCCGCGCCCGCCGGCAACAACGACAGGACGACGGCACGATGGCAGAACCGAAGGCGCTCCCTCGCGACTGGCA GCGGATCTTTTCCGCCGGCCGCAGCGTGTCCGGGCGGCGCCTCGGGGCGTCGCCGCGCGCCGACCTGTTTCTCGCCGGCT TCATCGTGTCGGTGGTCGCGCTGTTCATCCTGCCGCTGCCGCAGGCCGCGCTCGACGGGATGATCTCGCTGAACCTTGCG GCGAGCGTCGTGCTGCTGACGGTATCGACCTACGTGCCGTCGGCGGTCAGTTTTTCGTCGTTTCCCGCGCTGCTGCTGTT CACCACGCTGTTCCGGCTCGCGCTGAACATCGCGTCGTGCAAGCTGATCCTGCTGCACGCGAACGCGGGCCATGTGATCG ACGCGTTCGGGCGGCTCGTGGTCGGCAATAACGTCGTGGTGGGCGGCGTGGTGTTCCTCGTGATCGCCGTCGTGCAGTTC ATCGTGATTGCAAAGGGCTCCGAACGGGTCGCCGAAGTCGGCGCGCGCTTCTCGCTCGACGCGATGCCGGGCAAGCAGAT GAGCATCGATGCGGACCTGCGCGCGGGCATCATCAGCGCCGACGAAGCGCGCGAGCGCCGCGAGAGGCTCGAGCAGGAAT CGCAGATGCATGGCGCGATGGACGGCGCGATGAAGTTCGTGAAGGGCGACGCGATCGCCGGCCTCGTGATCGCGTTCATC AACATCGTCGCGGGGATCGCGGTCGGCACGCTGATGCACGGCATGGATATCGGCGAGGCGCTGCAGCGTTACGCGATCCT GACGGTCGGCGACGGGATGGCGTCGCAGATTCCGTCGCTGCTGGTGTCGATCGCGGCCGGCATCGTGACGACGCGCGTCG CGACGCGCGACACGCGGCAGCGCCAGCTCGGCGAGCAACTGGGCGAGCAGCTCGGCGCGCATCCGCGTGCGCTGCTGATC GCGGCGCTCGTGCTCGCCGGCTTTCTCGTCGTACCCGGTTTCCCGAAATGGTCGTTCGCATTGATCGCGCTCGGCCTCGG CGCGTTCGCCGTCACGCAGCTCAAGCGCAAGACGACCGCGCCGAGCTTCAACCTGATTCATATTGCCGGACGCATCGGCG CGACCGACGACGGCCAGCCCGCGAAGGTGTCGCATGCGGCGGGCGTCACGTCGCTGATCGCGGTGTCGCTGTCGGACGAC CTGCGCACGACGCTGAATCTCGCGCAGCTGCAGACCGCGCTGTCGAGCGCGAAGGCGCGCGTCGACGCGGATATCGGCAC GGTGTTTCCGCGCATCACGCTGAACGACGACGAGGGCGCGCCGGCCGGCACCTACCGGATCTATTTGCAGGACGTGCTCG CCGCGCATGGCGCGCTGAAGCCGGGCTGGCTGCTGTGGGACGGCGTCGCGCCGCTGCCGGAACGCGCGGAGCGCCAGCCG GCCGAGGCCTTCGGCCCGTTCGCGACCGCGCTGTGGATCAAGCCCGACGGCGCGGCGCCGGACGGCAAGTGGCTGACGAG CGAAGGCGCGCTCGCCGCGCACGTCGAGCAGGTCGTGCGCCAGCACGCGGACGAGCTGCTCGGCATCCAGGAGACGCAGG CGCTCGTGCACCTGGTGCGCCGCGAGCATCCCGAACTGGTCGGCGAACTGACGCGGCTCGTGCCGCTGCAGCGCGTGACC GAGGTGCTGCGCCGGCTGCTCGCCGAACAGGTGCCGATCCGCAACCTGCGCGTGATCTTCGAGAGCCTGATCACATGGGC GCCGAACGAACCGGACGACGTGATCGCGCTGGTCGAGCTGGTGCGCGTCGACCTGCGCCGGATGATCACCGATCGCCATG CGGGCGCGGCGCGCCAGCTGCGTGTCGTGCTGTTCGAGCAGAACCTGCAGGAGCGGATCGAGAGCGCGGTGATGCGGACC AAGCAGGGCAATTTCCTCGCGCTGTCGAGCGCGATCAAGCAGGACATCGGCGAGCAGGTGCGCGCGATCGTGCAGGCCGC GCAGGCGGCCGGCGCCGGCGGCCACGGCAATCCGCAAGGTGCGCCGCGGCTCGCGGTGATGGTCGCGCTCGGCGCGCGCC GCTACGTGAAGACGATCTTGCAGCCGGTGCTGCCCGAGCTCGCGGTGCTGTCGTACCAGGAGGTCGAGGAAGACGTGCAG CTCCATACGGTCGGCTGGGTGAAGAACCCGCCCGACGACGGCACGCTCGGCGCGGGCGCCGGCGTGCGCGCGCCCGGAGG CGTGCAATGA Protein sequence : MTARARRQQRQDDGTMAEPKALPRDWQRIFSAGRSVSGRRLGASPRADLFLAGFIVSVVALFILPLPQAALDGMISLNLA ASVVLLTVSTYVPSAVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQF IVIAKGSERVAEVGARFSLDAMPGKQMSIDADLRAGIISADEARERRERLEQESQMHGAMDGAMKFVKGDAIAGLVIAFI NIVAGIAVGTLMHGMDIGEALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDTRQRQLGEQLGEQLGAHPRALLI AALVLAGFLVVPGFPKWSFALIALGLGAFAVTQLKRKTTAPSFNLIHIAGRIGATDDGQPAKVSHAAGVTSLIAVSLSDD LRTTLNLAQLQTALSSAKARVDADIGTVFPRITLNDDEGAPAGTYRIYLQDVLAAHGALKPGWLLWDGVAPLPERAERQP AEAFGPFATALWIKPDGAAPDGKWLTSEGALAAHVEQVVRQHADELLGIQETQALVHLVRREHPELVGELTRLVPLQRVT EVLRRLLAEQVPIRNLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGAARQLRVVLFEQNLQERIESAVMRT KQGNFLALSSAIKQDIGEQVRAIVQAAQAAGAGGHGNPQGAPRLAVMVALGARRYVKTILQPVLPELAVLSYQEVEEDVQ LHTVGWVKNPPDDGTLGAGAGVRAPGGVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 3e-69 | 43 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 6e-70 | 43 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 2e-69 | 43 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 3e-70 | 43 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 1e-69 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bamb_4230 | YP_776117.1 | type III secretion FHIPEP protein | VFG0198 | Protein | 2e-80 | 42 |
| Bamb_4230 | YP_776117.1 | type III secretion FHIPEP protein | VFG0064 | Protein | 2e-82 | 41 |
