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Name : Bamb_0839 (Bamb_0839) Accession : YP_772732.1 Strain : Genome accession: NC_008390 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 926608 - 927909 bp Length : 1302 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACATCCAGTTGCTGCGCAAAGACCTCGACGGCGTCGCGAAGCGCCTCGCCGATCGCGGCTACACCCTCGACGT CGCCGCGTTTTCCGCCCTCGAAGCGGAACGCCGCGCGATCCAGACCCGTACCGAAGAGCTCCAGGCGCGCCGCAACAGCC TGTCGAAGCAGATCGGCGCGATGAAGGGGAAGGGCGAGGACACGTCGGCCGTGATGGCCGAAGTCGGCGGCATTGGCGAC GAGATGAAGGCGTCGGAGGCCAAGCTCGGCGAGATCCAGACGCGTCTGTCCGACCTGATGCTGGGCATGCCGAACATCGC GCACGAAAGCGTGCCGGTCGGCAAGGACGAAGCCGACAACGTCGAGGTGCGCCGCTGGGGCACGCCGCGCGAGTTCGACT TCGCGGTGAAGGATCACGTCGACGTCGGCACCCCGCTCGGTCTCGATTTCGAAACCGGCGCGAAGCTCGCCGGCGCACGC TTCACGATGCTGCGCGGCTCGATCGCACGCCTGCACCGCGCGCTCGCGCAGTTCATGATCGACACGCACACGCTGCAGCA CGGCTACACCGAGACGTACACGCCGTACATCGTCAATCCCGAGATCCTGTACGGCACGGGCCAGCTGCCGAAGTTCGCGG ACGACATGTTCCGCGTCGAGAAGGGCGGCGGCGAGAACACGATCACGCAATACCTGATCTCGACGTCCGAGATTTCGCTG ACGAACACCGTGCGCGAATCGATCGTCGAAGGCTCCGCGCTGCCGATCAAGCTGACCGCGCATTCGCCGTGCTTCCGCTC GGAAGCCGGCTCGTACGGCCGCGACACGCGCGGGATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGGTCG TCGCGCCCGACGCATCGTACGCGGCGCTCGACGAGATGGTCGGCCACGCGGAAGCGATCCTGCAGAAGCTCGGCCTGCCG TACCGCGTCGTGGCGCTGTGCACCGGCGACATGGGTTTCTCTGCCGCGAAGACGTTCGACCTCGAAGTGTGGCTGCCCGC GCAGAACACCTATCGCGAGATCTCGAGCTGCTCGAACACCGAGGCGTTCCAGGCGCGCCGGATGCAGGCGCGGTTCCGCA ATGCGCAGGGCAAGCCGGAACTCGTGCATACGCTGAACGGCTCGGGGCTGGCCGTCGGCCGCACGCTTGTCGCGGTGCTG GAGAACTACCAGAATGCGGATGGCTCGGTCACGGTGCCGGAAGCACTGCGTCCGTACATGGGCGGCATGGAACGTATCGA CGCGCCTGCTCAGGTGTCGTAA Protein sequence : MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGAMKGKGEDTSAVMAEVGGIGD EMKASEAKLGEIQTRLSDLMLGMPNIAHESVPVGKDEADNVEVRRWGTPREFDFAVKDHVDVGTPLGLDFETGAKLAGAR FTMLRGSIARLHRALAQFMIDTHTLQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTITQYLISTSEISL TNTVRESIVEGSALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPDASYAALDEMVGHAEAILQKLGLP YRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQARRMQARFRNAQGKPELVHTLNGSGLAVGRTLVAVL ENYQNADGSVTVPEALRPYMGGMERIDAPAQVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-105 | 57 |
