Gene Information

Name : Bamb_0821 (Bamb_0821)
Accession : YP_772714.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 904934 - 906055 bp
Length : 1122 bp
Strand : -
Note : KEGG: bur:Bcep18194_A4064 riboflavin biosynthesis protein RibD/riboflavin-specific deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domai

DNA sequence :
ATGTTCTCGGATACCGATTTCGCCCACATGCAGCGCGCGCTGACGCTCGCCGCGCGCGGCATGTATACGACCGCGCCGAA
CCCGCGCGTCGGCTGCGTGATCGTCAAGGACGGCAACGTCATCGGCGAAGGCTTCACGCAGCCGGCCGGCCAGGACCACG
CGGAGGTGCAGGCGCTGAAGGACGCGCGTGCGCGCGGCCATGACGTCGCCGGCTCCACCGTCTACGTGACGCTCGAGCCG
TGCAGCCACTTCGGCCGCACGCCGCCGTGCGCGAACGCGCTGATCGACGCGCGCGTCGCGAAGGTCGTCGCGGCGATGGA
AGACCCGAACCCGCAGGTATCGGGGCGCGGCCTCGGGATGCTGCGCGACGCGGGCATCGACGTGCGCTGCGGGCTGCTCG
CGAACGAAGCGGGCGAACTGAACATCGGCTTCGTGTCGCGGATGACGCGCGGCCGCCCGTGGGTGCGGATGAAGACGGCC
GCGTCGCTCGACGCACGCACCGCGCTGCCGTCCGGCGAAAGCCAGTGGATCACCGGCGAGGCCGCGCGCCTCGACGGCCA
CGCATGGCGCGCGCGTGCATGCGCGATCCTCACCGGGATCGGCACGGTGCGGGAGGACAACCCGCTCCTGACGGTGCGCG
GCATCGACACGCCGCGCCAGCCGCAGCGCGTGCTGGTCGACAGCCGCCTCGACCTGCCGCTCGATGCGCGCCTGCTCGAG
GGTGCGCCGCTGCTGATCTTCTGCGGCCGGCTCGATGCGGCCGGCGAAGTGCGCGCGAAGGTGCTGAAGTCGCGCGGCGC
GGAAATCGTGCCGCTCGCGAATGCGCACGGCAAGGTCGACCTGCCCGCGATGCTCGCGGCGCTCGGCGCGCGCGGCGTCA
ACGAACTGCACGTCGAGGCCGGCCACAAGCTGAACGGTTCGCTGCTGCGCGAGCAGTGCGTCGACGAGCTGCTCGTCTAT
CTCGCGCCGAGCCTGCTCGGCAGCGACGCGGCCGGCATGTTCGACCTCGCCGCGCCGGCGAGCCTCGACGCGCGCACGCG
GCTCGCGTTCCACAGCGTCGAGCGGATCGGCGACGATCTACGGATTCTCGCGCGCGTCGCGCCGCCGGCCGCCACCCACT
GA

Protein sequence :
MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQDHAEVQALKDARARGHDVAGSTVYVTLEP
CSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLANEAGELNIGFVSRMTRGRPWVRMKTA
ASLDARTALPSGESQWITGEAARLDGHAWRARACAILTGIGTVREDNPLLTVRGIDTPRQPQRVLVDSRLDLPLDARLLE
GAPLLIFCGRLDAAGEVRAKVLKSRGAEIVPLANAHGKVDLPAMLAALGARGVNELHVEAGHKLNGSLLREQCVDELLVY
LAPSLLGSDAAGMFDLAAPASLDARTRLAFHSVERIGDDLRILARVAPPAATH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-60 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-60 45