Gene Information

Name : Bamb_0705 (Bamb_0705)
Accession : YP_772598.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Resistance
Product : D-isomer specific 2-hydroxyacid dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1052
EC number : -
Position : 782586 - 783584 bp
Length : 999 bp
Strand : -
Note : PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A3918 D-isomer specific 2-hydroxyacid dehydrogenase

DNA sequence : 
GTGCGCGTGATCCTGTTCAGCAGCCGGCAGTACGACGACGAATCGTTTACCGCCGCCAACCGGCAGTTCGGCTATCGGCT
GCACTTCCAGCCATCCCATCTCGACGCGGAAACCGCGATCCTCGCGCACGGCTATGAAGTCGTGTGTCCGTTCGTCAACG
ACACCGTCGACGCGGCCGTGCTCGAACGGCTCGCCGACGGCGGCACGCGCCTGATCGCGCTGCGCTCGGCCGGCTTCAAC
CACGTCGACCTGGCCACCGCCGAGCGGCTTGGCATCGCGGTCGTACGGGTGCCCGCCTATTCGCCGCATGCGGTGGCCGA
ACACGCGGTCGCGCTGATCCTCGCGCTCAACCGCCGGCTGCCGCGCGCGGTCGCGCGCACGCGCGAAGGCGACTTCTCGC
TGAACGGCCTGCTCGGCTTCGACCTGCACGGCAAGACCGTCGGCGTGATCGGCACCGGCCTGATCGGCAGCGTGTTCGCG
AAGATCATGATGGGTTTCGGAATGCACGTGCTCGCGCACTCGATGCCGCCGTACGACGACGAGCTGATCGCGTTCGGCGC
GCGCTACGTCGAGCTCGACGAGCTGCTGCACCACGCCGACATCGTCAGCCTGCACTGCCCGCTGCTGCCGTCGACGCACC
ATCTGATCAACGCGCAGACGCTCGCGCGGATGAAGCACGGCGCGATGCTGATCAATACCGGCCGCGGCGGCCTCGTCGAC
GCGCAGGCGTTGGTCGACGCGCTCAAGAGCGGCCAGCTCGGCCATCTCGGGCTCGACGTGTACGAGGAGGAAAGCGGGCT
CTTCTTCGAGGATCACTCCGACCTGCCGCTGCAGGACGACGTGCTCGCGCGCCTGCTGACGTTCCCGAACGTAATCGTCA
CGTCGCACCAGGCGTTCTTCACGCGCGAGGCGCTCGCCGAGATCGCGCACACGACGCTGCTGAACATCGAGGCATGGCAC
GCCGGCACGCCGACCAACGTCGTCACGGCCGGGCGCTGA

Protein sequence : 
MRVILFSSRQYDDESFTAANRQFGYRLHFQPSHLDAETAILAHGYEVVCPFVNDTVDAAVLERLADGGTRLIALRSAGFN
HVDLATAERLGIAVVRVPAYSPHAVAEHAVALILALNRRLPRAVARTREGDFSLNGLLGFDLHGKTVGVIGTGLIGSVFA
KIMMGFGMHVLAHSMPPYDDELIAFGARYVELDELLHHADIVSLHCPLLPSTHHLINAQTLARMKHGAMLINTGRGGLVD
AQALVDALKSGQLGHLGLDVYEEESGLFFEDHSDLPLQDDVLARLLTFPNVIVTSHQAFFTREALAEIAHTTLLNIEAWH
AGTPTNVVTAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 2e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_0705 YP_772598.1 D-isomer specific 2-hydroxyacid dehydrogenase AF310956.2.orf4.gene Protein 4e-44 41