|
Name : Bamb_0538 (Bamb_0538) Accession : YP_772431.1 Strain : Genome accession: NC_008390 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 603192 - 605264 bp Length : 2073 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCCGCCGTGCCCCCGTTTCCTCGACTCGTTCTCCGGACTCGACATGACGACTTCGTCTCCCGCCTCTACCACTCTGAT GGCCAACGCGATCCGTGCGCTCGCGATGGACGCCGTCCAGCAAGCGAACTCCGGCCACCCCGGCATGCCGATGGGCATGG CCGAAATCGGCGTTGCACTCTGGTCGCGCCACCTGAAGCACAACCCGACGAACCCGCACTGGGCAGACCGCGACCGTTTC GTGCTGTCGAACGGCCATGGCTCGATGCTGCTGTACTCGCTGCTGCACCTGACCGGCTACGACCTGCCGATCGAAGAGCT GAAGAACTTCCGCCAACTGCACTCGAAGACGCCGGGCCACCCGGAATATGGCATCACGCCGGGCGTCGAGACGACCACCG GCCCGCTCGGCCAGGGTCTCGCGAACGCGGTCGGCATGGCGCTGGGCGAAGCGTTGATGGCCGACGAGTTCAACCGTGAC GGCGCGAAGATCGTCGATCACCACACGTACGTGTTCCTCGGCGACGGCTGCCTGATGGAAGGCATCTCGCACGAAGCCTG CTCGCTCGCGGGCACGCTGAAGCTGAACAAGCTGATCGCGCTGTACGACGACAACGGCATCTCGATCGACGGCGACGTCG TCAACTGGTTCCACGACGACACGCCGAAGCGCTTCGAGGCATACGGCTGGAACGTGATCCCGAACGTGAACGGCCACGAC GTCGACGCGGTCGACGCGGCCATCGCGAAGGCGAAGCTGTCGGACAAGCCGACGATGATCTGCTGCAAGACGGTGATCGG CAAGGGCGCGGCGACCAAGGCCGGCGGCCACGACGTGCACGGCGCGGCGCTCGGCGCGGAAGAAATCGCGAAGACGCGCG AAGCGCTCGGCTGGAAGTGGGAGCCGTTCGTGATTCCGCAGGAAGTCTATGCGGCCTGGGACGCGAAGGAAGCCGGCAAG CGTGCCGAGACCGAATGGGATGCGACGTTAGCGCAATATCGCGAGAAATTCCCCGCGCAAGCCGCTGAATTCGAGCGCCG GATGGCCAACCAGCTGCCGGCCGACTGGGCCGAGAAGGCCGCGGCGATCATCGCCGGCGCGAACGAGCGCGCCGAGACGG TCGCGACCCGCAAGGCTTCGCAGCAGGCCATCGAAGGGCTCGCCGCCGCACTGCCGGAACTGCTCGGCGGCTCGGCCGAC CTGACCGGCTCGAACCTGACCAACTGGAAGGCATCGAAGGCGGTGCGCGCGAATCCGGAAGGCGCGGGCGTGCTGCTCGG CAACCACATCAACTACGGCGTGCGCGAATTCGGCATGAGCGCCGCGCTCAACGGCCTCGCGCTGCACGGCGGCCACAAGC CGTTCGGCGGCACGTTCCTGACGTTCTCCGACTACAGCCGCAACGCGCTGCGCGTCGCGGCGCTGATGAAGGTCCCGACG ATCTTCGTGTTCACGCACGATTCGATCGGCCTCGGCGAAGACGGCCCGACGCACCAGTCGATCGAGCACGTGTCGAGCCT GCGCCTGATCCCGAACCTCGACGTGTGGCGTCCGGCCGACACGGTCGAGACGGCCGTCGCATGGACTCACGCGGTTGCCG CCGACCGTCCGTCGAGCCTGATCTTCAGCCGTCAGAACCTCGCGTTCAACCCGCGTACCGATGCGCAGATCGCGAACATC GAGAAGGGCGGCTACGTGCTGAAGGACTGGGACGAAGAGATCGTCGCGCGCAAGATCATCCTGATCGCGACGGGCTCGGA AGTCGAGCTCGCGATGAAGGCCGTCGAGCCGCTCGCGCAGCAGGGCATCGCGGCCCGCGTCGTGTCGATGCCGTCGACCA ACGTGTTCGATCGCCAGGACGCCGAATACCGCGAACGCGTGCTGCCGCACGGCGTGCGCCGCGTCGCGATCGAAGCGGGC GTGACGAGCTTCTGGCACAAGTATGTCGGCCTCGAAGGCGGCGTCGTCGGGATCGACACGTTCGGCGAATCGGCACCGGC CGGCGTGCTGTTCAAGTACTTCGGCTTCACCGTCGAGCACGTCGTCGAGACCGCGAAGGCCGTGCTGGCCTAA Protein sequence : MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRD GAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD VDAVDAAIAKAKLSDKPTMICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKWEPFVIPQEVYAAWDAKEAGK RAETEWDATLAQYREKFPAQAAEFERRMANQLPADWAEKAAAIIAGANERAETVATRKASQQAIEGLAAALPELLGGSAD LTGSNLTNWKASKAVRANPEGAGVLLGNHINYGVREFGMSAALNGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPT IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNLDVWRPADTVETAVAWTHAVAADRPSSLIFSRQNLAFNPRTDAQIANI EKGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAG VTSFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 63 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 59 |
