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Name : Bamb_0051 (Bamb_0051) Accession : YP_771946.1 Strain : Genome accession: NC_008390 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 59218 - 60717 bp Length : 1500 bp Strand : - Note : KEGG: bur:Bcep18194_A3243 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : GTGAGCAACGTGCTCGCGTCCTCGACCCAGGACGGCGCGCCGGGCGAACGGCAGCCGCCGTCACCGCTCGCCGCGCGCCT GTTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTACTGATCGCGCATCAGCTCGACGACACGCTCGAGGTGTGGATCAGCG AGCGCACGAACGATGCGGCGCTCGCCGAAATCGCGCGCAACTTCGGCTCGATTTCCGTGCACCGCGTGCCGGCCGACGAG CTCGCGCAGGCGATCAACCAGGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGGTCGTCGGCGAGGTCGAAGGCGAAGT CGACCTGTCGCGACTGATGCAGGACATCCCCGAAGTCGAAGATCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGGA TGATCAACGCGCTGCTCACGCAAGCGGCGCGCGAACAGGCATCGGACATTCACATCGAGCCGTTCGAGAACGCGTCGGTC GTGCGGTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGGCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGAT CAAGATCATGGCGCAGCTCGACATCGCCGAGAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGGC CGGTCGACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTCCGTCTGCTGGAAAAGGATGCGCAG CGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTCCAGTTCGACAAGCTGATCGGCCGCCCGCACGGGAT CGTGCTGGTGACGGGCCCGACCGGCTCGGGCAAGACGACCACGCTCTATGCGTCGATGTCGCGGCTCGAAACGGCGACGA CCAACATCATGACCGTCGAGGATCCGATCGAATACGACCTGTCCGGCATCGGCCAGACGCAGGTGAACGAGCGGATCGGG ATGACCTTTGCCCGTGCGCTGCGTTCGATCCTGCGTCAGGATCCGGACGTGATCATGATCGGCGAAATCCGTGACCTCGA AACCGCGCAGATCGCGGTGCAGGCCTCGCTCACGGGCCACCTCGTGCTCGCGACGCTGCACACCAACGATGCGGCCTCGG CCGTCACGCGCCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGTCTG GTGCGCCAGCTCTGCCCAGCCTGCAAGGAAGAGCGGCACGAGGACGGCCGCACCGTGTGGCATCCGGTCGGCTGCGACCG GTGCGGACATTCGGGCTATGCGGGCCGGCGGGGGGTATACGAACTGCTGCTGATCGACGATTCGATCCGCGCGCTGATCC ACCGCAACGCGGCCGATGCGGAGATTCTCGCCACGGGCCGCGCACAAGGGATGCGCACGCTGCGCGACGACGCCGAGCGC TGGCTCGCGGCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG Protein sequence : MSNVLASSTQDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTNDAALAEIARNFGSISVHRVPADE LAQAINQAYARQDGSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASV VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQ RLNLEALGMGRDTLVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIG MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRL VRQLCPACKEERHEDGRTVWHPVGCDRCGHSGYAGRRGVYELLLIDDSIRALIHRNAADAEILATGRAQGMRTLRDDAER WLAAGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-115 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-115 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bamb_0051 | YP_771946.1 | general secretory pathway protein E | VFG0182 | Protein | 9e-123 | 56 |
| Bamb_0051 | YP_771946.1 | general secretory pathway protein E | VFG1876 | Protein | 4e-117 | 52 |
| Bamb_0051 | YP_771946.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-115 | 52 |
| Bamb_0051 | YP_771946.1 | general secretory pathway protein E | VFG0233 | Protein | 8e-87 | 49 |
| Bamb_0051 | YP_771946.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-77 | 48 |
