Gene Information

Name : Bamb_0503 (Bamb_0503)
Accession : YP_772396.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 567709 - 568212 bp
Length : 504 bp
Strand : -
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A3684 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen

DNA sequence :
ATGAGCAAAGTTACGCTGGGTGGCAACCCGATCGATCTCGCCGGCACGTTCCCGGCCGTCGGCTCGCAAGCCCCCGACTT
CAAGCTGGTCGGCAAGGACCTCGCCGATCTGTCGCTCGCCAGCTTCGCCGGCAAGCGCAAGGTGCTGAACATCGTCCCGA
GCCTCGACACGCCGACCTGCGCGACGTCGACCCGCAAGTTCAACGAAGCCGCGTCGTCGCTGGACAACACGGTCGTGGTC
GTCGTGTCGGGCGACCTGCCGTTCGCCGCCACGCGCTTCTGCACGACCGAAGGCCTGGCGAACGTCGTGACGGCTTCGAC
GTTCCGCGGCGGCCGCGCCTTCGCGAACGCCTACGGCGTCGACGTGACGAGCGGCCCGCTGAACGGCCTGACGGCCCGCG
CGGTCGTCGTGCTCGACGCGCAGGACAAGGTGATCCACGCGCAACTCGTCGACGAGATCAAGGACGAGCCGAACTACGAC
GCAGCACTCGCCGCACTGAAGTAA

Protein sequence :
MSKVTLGGNPIDLAGTFPAVGSQAPDFKLVGKDLADLSLASFAGKRKVLNIVPSLDTPTCATSTRKFNEAASSLDNTVVV
VVSGDLPFAATRFCTTEGLANVVTASTFRGGRAFANAYGVDVTSGPLNGLTARAVVVLDAQDKVIHAQLVDEIKDEPNYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-33 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 5e-34 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 8e-34 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-34 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_0503 YP_772396.1 redoxin domain-containing protein VFG0087 Protein 2e-34 47