Gene Information

Name : Bamb_2564 (Bamb_2564)
Accession : YP_774454.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2821996 - 2822832 bp
Length : 837 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: rso:RSc3089 ISRSO11-transposase orfB protein

DNA sequence :
GTGCACGAGCTTAGGCAGCACCATCCGGTAGCGGCACTTCTGAAGGCGGCCGGCTTGGCGCGTAGCACGTTCTATTACCA
GCTTGGGACGCTGAGCGTCGACGATCGCCGTGCCGATCTCAAGGCGAAGATCCGGGCGGTGTTCGACCATCACAAGGGCC
GCTACGGCTATCGACGCGTCACGGCTGCGATTCGGCAAACCGGGCATCTCGTCAACCACAAGGCCGTGCAGAGGCTGATG
CAGCAATTGCAGTTGAAATCCCTGCTGCGCCCGAAGAAATACCGCTCCTGGCGAGGCGAAGTCGGCAAAGCCGCACCCAA
CCTGCTGCAACGTCAGTTTAGTGCCGCACAGGCCAATCAGAAGTGGGTGACGGATGTGACGGAATTCAACGTCGGCGGTC
AGAAGCTGTACCTGTCGCCGGTGATGGATCTGTACAACGGCGAGATCGTGGCTTACCAGATGGATCGACGCCCAAGCTTC
GAGTTGGTCAGCGGCATGCTCAAGAAGGCGCTGACCAAACTCAAACGCACGGACAGACCGCTATTGCATTCGGACCAAGG
CTGGCAATACCGAATGCCGGCGTTTCGCCGGCAACTGAAGCGGCGCAAACTGACTCAAAGCATGTCCCGCAAGGGGAACT
GCCTCGATAATGCTGCGATGGAAAGCTTCTTCGGCACGCTCAAGTCCGAGTGCTACAAGGGACATCGCTTCACTTGCGTG
GAGCATTTGCGCGACACGCTCAATCACTACATCCACTACTACAACCACGAACGCATCAAGCTCAAATTGAAAGGGCTGAG
TCCCGTGCAATACAGAACTCAGCCCTTGAGCGCCTAG

Protein sequence :
MHELRQHHPVAALLKAAGLARSTFYYQLGTLSVDDRRADLKAKIRAVFDHHKGRYGYRRVTAAIRQTGHLVNHKAVQRLM
QQLQLKSLLRPKKYRSWRGEVGKAAPNLLQRQFSAAQANQKWVTDVTEFNVGGQKLYLSPVMDLYNGEIVAYQMDRRPSF
ELVSGMLKKALTKLKRTDRPLLHSDQGWQYRMPAFRRQLKRRKLTQSMSRKGNCLDNAAMESFFGTLKSECYKGHRFTCV
EHLRDTLNHYIHYYNHERIKLKLKGLSPVQYRTQPLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-79 55
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 9e-66 49
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-57 48
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 2e-57 48
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 7e-50 45
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-50 45