Gene Information

Name : Bamb_2102 (Bamb_2102)
Accession : YP_773992.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2310463 - 2311137 bp
Length : 675 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_I0274 DNA-binding response regulator

DNA sequence : 
ATGCGAGTACTGACGGTCGAAGACGATGCGGTGACCGCGAACGAGATCGTTGGCGAACTGACCGCGCGCGGATTCGAGGT
CGACTGGATCGACAACGGCCGCGAAGGAATGATGCGCGCGATGAGCGCGTCCTACGATGCGATCACGCTCGACCGGATGC
TGCCCGGCGCTGACGGGCTCGCGATCCTGACCGCGATGCGCACGGTCGGCATCGACACGCCGGTGCTGATGCTGAGCGCG
CTCGGCGACGTCGACGAGCGCATCCGCGGGCTGCGTGCGGGCGGCGACGACTACCTGACCAAGCCGTTCGATTCCGGCGA
ACTGAGCGCGCGCATCGAGGTGCTGTTGCGCCGCCGGCAGGCCTCGGGCGTGCCGCAGCAGACGCTGTTGACGGTCGGCC
CGCTCGAACTCGACCTCATTTCGCGCTGTGCGCGCCGCGGCGTCGACGAGATTCCGTTGCTGCCCACCGAGTTTCGCGTC
CTCGAATTCATGATGCGCAACGCGGGGCAGACGATCACGCGCACGATGCTGTTCGAGGCCGTGTGGGGCTATCACTTCGA
CCCGGGCACCAACCTGATCGATGTCCACATGGGGCGGCTGCGCAAGAAGATCGACCCGCCGGGCGCCGTGCCGATGATCC
AGACCGTGCGCGGCTCGGGCTACATGCTCCGATGA

Protein sequence : 
MRVLTVEDDAVTANEIVGELTARGFEVDWIDNGREGMMRAMSASYDAITLDRMLPGADGLAILTAMRTVGIDTPVLMLSA
LGDVDERIRGLRAGGDDYLTKPFDSGELSARIEVLLRRRQASGVPQQTLLTVGPLELDLISRCARRGVDEIPLLPTEFRV
LEFMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPGAVPMIQTVRGSGYMLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_2102 YP_773992.1 two component transcriptional regulator BAC0125 Protein 7e-38 44
Bamb_2102 YP_773992.1 two component transcriptional regulator BAC0347 Protein 2e-39 44
Bamb_2102 YP_773992.1 two component transcriptional regulator BAC0111 Protein 1e-40 44
Bamb_2102 YP_773992.1 two component transcriptional regulator BAC0197 Protein 2e-38 44
Bamb_2102 YP_773992.1 two component transcriptional regulator BAC0083 Protein 4e-40 42
Bamb_2102 YP_773992.1 two component transcriptional regulator BAC0638 Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_2102 YP_773992.1 two component transcriptional regulator VFG1389 Protein 2e-36 43
Bamb_2102 YP_773992.1 two component transcriptional regulator VFG0596 Protein 4e-33 41