Gene Information

Name : Bamb_2000 (Bamb_2000)
Accession : YP_773890.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2196724 - 2197665 bp
Length : 942 bp
Strand : +
Note : PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RSc2588 probable transcription regulator protein

DNA sequence :
ATGGAACTTCGGCACCTGCGTTGCTTCCTTGCCGTCGCCGAAGAGCTGCATTTCGCCCGTGCGGCGGAGAAATTGCATGT
CGAGCAATCGCCTTTATCGCGGGCCATCAAGGAACTGGAAGAAGAACTGGGCGTGGTGCTGTTTGCGCGAACTACGCGCA
GCACTCGGTTGACCCGTGCGGGCAAGCTGTTTTTAGAGCATGTGCCGCGCGTCTTCTCTGCCTTGCAGCAGGCCCGCGAC
AGCGTGAAGGCAGCGGCCAACGGCTTCCACAGCCAATTGCGCGTTGCGCTGTCCGACGGCATGACGCCCTCACGTCTGCC
GGCTTTGCTGGCGCTCTGTCGGCAGGAGGAGCCCGAAGTCGAAATCCGTTTCTTTGAGGTGCCGCTGGCGCAACAGATCA
AAGGGCTGTACGGCGATCTGTACGACGTAGGCTTCGCCCGCGCCGATGAAGTCGGCGATGGCCTCATTGCCGAGCCGGTA
TGGAGTGATCCTCTGATGGTGGCCGTGCCGGCACGGCATCCCCTGCTGGCCCACAAGCGCATCCCTTTGGAAGAATTGCT
GCGCTATCCCCTGGTGCTGTGCGATCCGCAAGCGTGCGAGGGCCATGCCCGGCAGGTGGATCGTGTGCTGCGCCGTGTGG
ACATGGAACCGCTGGTGGCTGAACGGGTGGCGTCCTGCGACCTGATGATGGCGCTGGTGTCCGCAGGCATCGCTCTGGGG
CTGACGGGCTGCGCGCACATCTTGGCCAGCCAGGAACCTGGCGTAGTGGCACGGCCACTGACAGGCCGCTCACCGTTGCT
GACGACCTACTTGCTGCGTCCGGAAGGCGAGCCTTCGGAAATGCTCGCCCGCTTCATCGACCGTGTGCAGGCCATCGAAT
CACCCGAAGGTAGCAGGCCCACGCCGGGTCTTGATGCCGACTCTCTGGAGGAACCCGCATGA

Protein sequence :
MELRHLRCFLAVAEELHFARAAEKLHVEQSPLSRAIKELEEELGVVLFARTTRSTRLTRAGKLFLEHVPRVFSALQQARD
SVKAAANGFHSQLRVALSDGMTPSRLPALLALCRQEEPEVEIRFFEVPLAQQIKGLYGDLYDVGFARADEVGDGLIAEPV
WSDPLMVAVPARHPLLAHKRIPLEELLRYPLVLCDPQACEGHARQVDRVLRRVDMEPLVAERVASCDLMMALVSAGIALG
LTGCAHILASQEPGVVARPLTGRSPLLTTYLLRPEGEPSEMLARFIDRVQAIESPEGSRPTPGLDADSLEEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 7e-73 55
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 1e-49 41