Gene Information

Name : ldcA (Bamb_1955)
Accession : YP_773845.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 2152334 - 2153272 bp
Length : 939 bp
Strand : -
Note : catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine

DNA sequence :
ATGTCCTTCCAGCCCGCCGCGTCCTACACCATCCGCCTGCTGGCGCCGTCCGGTTATCCGCATGATCCCGACGCGATCAA
TCGCGCGCTCGAACGCCTGAGCGGCGCGCAGCAGCGCATCGAGAACATCGAGGCGACGCAGCGCCGCTTTCAGCGTTTCG
GCGGGACCGACGGCGAGCGAGCAGGCGACCTGAATCGCCTGGCGGATCCGGAGCGCGCGCTGCCGGACATCGGGCTCGCG
GTGCGCGGCGGCTACGGCGCCGCCCGCATCCTGCACGGGCTCGACTATCGCGGGCTCGAGCGCCGTTTGCGCGACCAGCC
GATCGCGCTGGTGGGCCACAGCGACTTCACCGCGATCCAGCTCGCGCTGTACGCGAAGGCGCGCATCAAGACCTTCGGCG
GCCCGATGCTGTCGGCCGACTTCGGCGCGGAAACACTGAGCGACTTCACGATGCAACACTTCTGGCAGACGCTGTCGCAG
CCGACCACGACGATCATCGCCGAAGCGCCGCAGGTGCAGACCGTGAACGTGACGGGCACGCTGTGGGGCGGCAATCTCGC
GATCCTGACGTCGCTCGTCGGCACGCCGTACATGCCCGATATCGAAGGCGGCATCCTGTTCATCGAGGACGTCAACGAGC
AGCCGTTCCGGATCGAACGGATGATCTATCAGCTGCATCTGTCGGGGCTGCTCGCGCGCCAGCAGGCGCTCGTGCTCGGG
CAGTTCACGGGCGCGCGGCCGTTCGACTACGACAACGGCTACGACATGCAGGCGATGATCGACCAGGTGCGCTCGGTGAT
CGGCATCCCGGTCGTCACGGGGCTGCAGTTCGGTCACGTGCCCGACCTGCTGACGCTGCCGTTCGGCGCGCACGCGCAGC
TCGTCGCGAATGCGCACGGTTTCCGGCTTACGCTGTCGGACTATCCGCATCTCGGCTGA

Protein sequence :
MSFQPAASYTIRLLAPSGYPHDPDAINRALERLSGAQQRIENIEATQRRFQRFGGTDGERAGDLNRLADPERALPDIGLA
VRGGYGAARILHGLDYRGLERRLRDQPIALVGHSDFTAIQLALYAKARIKTFGGPMLSADFGAETLSDFTMQHFWQTLSQ
PTTTIIAEAPQVQTVNVTGTLWGGNLAILTSLVGTPYMPDIEGGILFIEDVNEQPFRIERMIYQLHLSGLLARQQALVLG
QFTGARPFDYDNGYDMQAMIDQVRSVIGIPVVTGLQFGHVPDLLTLPFGAHAQLVANAHGFRLTLSDYPHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 1e-67 49