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Name : Bamb_1839 (Bamb_1839) Accession : YP_773729.1 Strain : Genome accession: NC_008390 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2024037 - 2025281 bp Length : 1245 bp Strand : + Note : PFAM: phage integrase family protein; KEGG: psp:PSPPH_0667 prophage PSPPH01, site-specific recombinase, phage integrase family DNA sequence : GTGCCACTTACCGACATCAAGATCCGACAAGCGAAGGCAGGCAACAAGCCTACCAAACTTACCGACGGCAATGGACTGTA TCTGTTGGTGAAGCCGTCCGGCTCCAAGCTTTGGCGATACAAGTACCGAATTGCCGGGAAGGAAAATGTCTTCGCGATCG GCGAGTATCCCACCACCAGCCTTCAAGCCGCGCGCGTAGCACGCGACGATGCGCGTGAGCTTGTCAAAAAGGGGCTACAC CCATCCCATGCACGACAGGAGGTCCTGTCTGCGCGCATTAACGAAGGCAAAGCCACTTTTCGTGCCGTCAGCGACGAGTG GCTGGAGAAGAAGCGCAAGACGTGGACGGAGCGGCACTTCGGCGAGATTCTGCGCATGCTCGAAGCAGACGCATACCCGT ACATCGGGAACCGCCCGATGCGCTCTATTACCGCCCACGATGTGCTTGCGCTGATGCGCCGGGTCGAAAAGCGCGGCTCC CCTTCCGTAGCGATCAAACTACGTCAGTACGTGTCCAACGTGTTCCAGTACGCGGTGATCACGCTTCGGGCCGATACCGA TCCAGCCTCGGTGTTGCGCGGAGCAGTTCTCAAGCCGCCGACCGAGCATGCTCGGCCGCTAAGCCGTGAAGAACTGAAGG CGCTGTTTCGGCAATTGCCCCTGTACAAGAGCAAGAGAACCACGATTGCGATCCGCCTGCTGATGATGCTGTTTCCGAGA ACGGTTGAGCTTTGTCGAGCGCGCTGGGAGGAAATCGATCTGGCCGCCGCTGAGTGGCGAGTCCCGCCGGAGAAGATCAA ATCGCGACGGCTGCACATCGTTCCGCTTCCCACGCAGGCGATCAGTCTGCTGCGCGAGTTGCAGGAGATCCACGGCAATC GCGGATATATCCTGCCGATCCTTCATAGCAATCGAAAACGGCCCCACATGAGTCGAGCAACAATCAATCGGGCGCTCGAC TCCATGATGCCGAACAACCCCGAACCGATAACGGGCCATGACTTCCGAGCAACCGCGTCGACGAACCTCCACGAGATGGG CTGGAAGGATGAAGTCGTTGAAATGCAGCTATCGCACAAGGACAAAGACAGAACCCGCTCAACGTACAATCACGCAAAGT ATCTTCCAGAGCGACGAGAAATGATGCAGTCATGGGCCGATTGGCTCAGCGACGTCGAGAATGACGCGCTCACCGACGCG TCGGCGGCAAGCACCGTCACGCCTGACCAACGACGTGAAGAATGA Protein sequence : MPLTDIKIRQAKAGNKPTKLTDGNGLYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPTTSLQAARVARDDARELVKKGLH PSHARQEVLSARINEGKATFRAVSDEWLEKKRKTWTERHFGEILRMLEADAYPYIGNRPMRSITAHDVLALMRRVEKRGS PSVAIKLRQYVSNVFQYAVITLRADTDPASVLRGAVLKPPTEHARPLSREELKALFRQLPLYKSKRTTIAIRLLMMLFPR TVELCRARWEEIDLAAAEWRVPPEKIKSRRLHIVPLPTQAISLLRELQEIHGNRGYILPILHSNRKRPHMSRATINRALD SMMPNNPEPITGHDFRATASTNLHEMGWKDEVVEMQLSHKDKDRTRSTYNHAKYLPERREMMQSWADWLSDVENDALTDA SAASTVTPDQRREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-67 | 42 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 7e-67 | 42 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 3e-67 | 42 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 3e-67 | 41 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 6e-66 | 41 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 6e-66 | 41 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 5e-66 | 41 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 5e-66 | 41 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-65 | 41 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-65 | 41 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-65 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bamb_1839 | YP_773729.1 | phage integrase family protein | VFG0783 | Protein | 3e-66 | 41 |
| Bamb_1839 | YP_773729.1 | phage integrase family protein | VFG0598 | Protein | 8e-66 | 41 |
