Gene Information

Name : Bamb_1460 (Bamb_1460)
Accession : YP_773352.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 1609342 - 1609680 bp
Length : 339 bp
Strand : +
Note : PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A4701 small multidrug resistance protein

DNA sequence : 
ATGCAGCTTCCGGGTTACGCATGGCTCGCGATCGCGATCGTCGCGGAAGTGGTCGGCACGTCCGCGCTGCGCGCGGCGGA
CGGCTTCACGCGCTTCTGGCCGTCGGCGCTCGTCGTGGCCGGTTACGGCATCGCGTTCTATTGTCTGTCGCTCACGCTGC
GCACGATGCCGGTCGGCATCATCTATGCGGTGTGGTCGGGCGCCGGCATCGTGCTGATCACGCTCGTCGCGATGCTGCTC
TATCGTCAGGTGCCGGACGTGCCGGCGGTGATCGGCCTCGGCCTGATCGTCGCGGGCGTCGTGGTGCTGAACCTGTTCTC
GAAGATGCAGGCGCACTGA

Protein sequence : 
MQLPGYAWLAIAIVAEVVGTSALRAADGFTRFWPSALVVAGYGIAFYCLSLTLRTMPVGIIYAVWSGAGIVLITLVAMLL
YRQVPDVPAVIGLGLIVAGVVVLNLFSKMQAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 8e-18 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_1460 YP_773352.1 small multidrug resistance protein BAC0002 Protein 1e-15 56
Bamb_1460 YP_773352.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 1e-15 56
Bamb_1460 YP_773352.1 small multidrug resistance protein CP001138.1.gene1489. Protein 2e-15 56
Bamb_1460 YP_773352.1 small multidrug resistance protein BAC0377 Protein 7e-19 54
Bamb_1460 YP_773352.1 small multidrug resistance protein NC_002695.1.913273.p Protein 4e-11 48
Bamb_1460 YP_773352.1 small multidrug resistance protein CP004022.1.gene1549. Protein 1e-15 48
Bamb_1460 YP_773352.1 small multidrug resistance protein BAC0150 Protein 4e-11 46
Bamb_1460 YP_773352.1 small multidrug resistance protein BAC0139 Protein 4e-13 46
Bamb_1460 YP_773352.1 small multidrug resistance protein BAC0327 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_1460 YP_773352.1 small multidrug resistance protein VFG1586 Protein 3e-18 44