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Name : Bamb_1433 (Bamb_1433) Accession : YP_773325.1 Strain : Genome accession: NC_008390 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1584364 - 1585998 bp Length : 1635 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein DNA sequence : ATGAAAACGGAACACATCGTTCAACGCTGGCAGTCGGAATCCGAAGCATCGGGCGTTGGCTTCGCGCAATACGTGGAGGG CCTGCTGGGCGCCGATCCGACGCGGCTCGCACAAGCGGCCGCCTGCCTTGGCATCGGCGCAGTCGACGCCGATACGCTGC GCGCGGCGCCGACGCGCTTCGACCTGCTGCCGCTGCACGACGCGCTGACCTGGCGCGTGCTGCCGGTCGAGCTCGACGGC GCGCCGTGCGTCGTCGTCGCCGATCCGTTCGCCCGCCACGTGCGCGACGAGCTGCTTGCGCGGTTCGGCGTGCGGCCGGT CGAACTGGCCATGAGTGTGCCGGGCGAAGTCGAGCGGCTGCTCGGCGACATCGAGTCGAGCGAGCGGCTGATGGACGACG TGACGATCGATACGCAGGGCGATTCGCTCGCACAGGCGATCGAGTCGATCTCGCTTGCGAGCATCGCGAAAGACGAGAGC CCGATCATCAGGCTCGTCAACACGACGCTCTACGACGCGCTGCAGAGCCGCGCGAGCGATATTCATCTCGAAGCGGTGCC GGACGGTCTGTCGATCCGCTACCGGATCGACGGCGTGCTGCAGTCGATCCGCCACATTCCCGGGCTCGAGGCGGCCGCGC AGACGCTGTCGCGCCTGAAGGTGCTCGCCGCGCTCGACATCGCGGAGAAGCGCGTGCCGCAGGACGGCCGTTTCAAGGTC GTGATGCAGGGCCGCGAGATCGATTTCCGCGTGTCGATCATTCCCGGCACCTATGGCGAAAACGCGGTGATGCGCGTGCT CGACAAGTCGCAGCGCGGCGACAGCGTGAGCCTCGACGTGCTCGGCTTCGACGCGCAGACGGCGCGGCGCGTGCGTGCGC TCGCGCACCGGCCTTACGGTCTGATGCTCGTGACGGGGCCGACCGGCAGCGGCAAGTCGACGACGCTGTACGCGGTGCTG TCGGAAGTCAACACGGGCGACGACAAGATCATCACGATCGAGGACCCGGTCGAATACGAGCTGAAGGGCGTGCTGCAGAT CCCGGTCAACGAGCGCAAGGGCCTCACGTTCGCGCGCGGGCTGCGCTCGATCCTGCGGCACGACCCGGACACGGTGATGG TCGGCGAGATCCGCGACGAGGAGACCGCGTCGATCGCCGTGCAATCGGCGCTCACCGGCCACCGCGTGCTGTCGACCGTG CATGCGAACGACGGGTTCAGCGTGATCGACCGCTTCATCTACATGGGCGTCGAGCCGTCGACGTTTCTCGAAGCGCTGAA CGGCGTCGTGTCGCAGCGCCTGGTGCGGCGGATCTGCGCGCGCTGCGGCGGCACGGCGGCGGACGGCGCCGACCTGAGCG GCGCGGCGCCCGACGAACTGAAGCGCGTGGTCACGCCCGGCACGGGCTGCGAGACCTGCCGCGGCACCGGCTATCACGGC CGGATCGGACTCGCGGAAGTGCTGACGCTCGATGCGGCGATGAAGGCCGCGCTGCTCGAGCGCTCGATCGAGAAGCGTGC GCAGGCCCTCGCCGGCAACGCCGACTACCGGTCGATGCGCGACGCGGGGCTTGCGGCGGTTCGCGCGCGGCTGACGACGT TCCAGGAGGTGCAACGTGCGATCGCCGTGGAATAA Protein sequence : MKTEHIVQRWQSESEASGVGFAQYVEGLLGADPTRLAQAAACLGIGAVDADTLRAAPTRFDLLPLHDALTWRVLPVELDG APCVVVADPFARHVRDELLARFGVRPVELAMSVPGEVERLLGDIESSERLMDDVTIDTQGDSLAQAIESISLASIAKDES PIIRLVNTTLYDALQSRASDIHLEAVPDGLSIRYRIDGVLQSIRHIPGLEAAAQTLSRLKVLAALDIAEKRVPQDGRFKV VMQGREIDFRVSIIPGTYGENAVMRVLDKSQRGDSVSLDVLGFDAQTARRVRALAHRPYGLMLVTGPTGSGKSTTLYAVL SEVNTGDDKIITIEDPVEYELKGVLQIPVNERKGLTFARGLRSILRHDPDTVMVGEIRDEETASIAVQSALTGHRVLSTV HANDGFSVIDRFIYMGVEPSTFLEALNGVVSQRLVRRICARCGGTAADGADLSGAAPDELKRVVTPGTGCETCRGTGYHG RIGLAEVLTLDAAMKAALLERSIEKRAQALAGNADYRSMRDAGLAAVRARLTTFQEVQRAIAVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-73 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-73 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bamb_1433 | YP_773325.1 | type II secretion system protein E | VFG0182 | Protein | 1e-70 | 46 |
| Bamb_1433 | YP_773325.1 | type II secretion system protein E | VFG2048 | Protein | 6e-74 | 46 |
| Bamb_1433 | YP_773325.1 | type II secretion system protein E | VFG2426 | Protein | 1e-63 | 43 |
