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Name : pRL110478 (pRL110478) Accession : YP_771512.1 Strain : Genome accession: NC_008384 Putative virulence/resistance : Unknown Product : putative ABC transporter component Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 512764 - 514392 bp Length : 1629 bp Strand : - Note : similarity:fasta; SWALL:Q7CSB2 (EMBL:AE008344); Agrobacterium tumefaciens; agr_l_2889p; length 544 aa; 542 aa overlap; query 1-542 aa; subject 1-542 aa DNA sequence : ATGACCAATAGAACACTTTTGAATGTCCGCAACCTGACGCTTCAGGTCACCGGAACCGGTGTGCAGGTCGTCAAGAACGT CAGCTTCGACATCGCGCCGGGCGAGATCTTCGGCATCGTCGGAGAAAGCGGATCGGGCAAGACGCTGGCAACACGCGCCC TGATCTCGCTGCTGCCGGCGCCCATCAAGGTGATCGGCGGCTCCGTTGCCTACAAGGGACGCGACGTGCTTTCCATGAAC GGCGCGCAATTGCGCCAATTGCGTGGTGCGGAAATCGGTGTCGTCTTCCAGGAGCCGATGACCTCGCTCAATCCCTCGAT GACCGTCGGCCGCCAACTCGAAGAAGGGTTGCAGCTGCATACGAGACTTTCGCAGGAAGAACGGCGCAGCCGGATCCTCG ATATGCTGAACCGGGTCGGGATCCGCGATCCCGCCGGGGCGCTTACTTCCTACCCGCATGAATTCTCGGGCGGCATGCGC CAGCGCATCATGCTGGCGTCGGTGATGCTGCTGAAACCGGCGCTCTTGATCGCCGACGAGCCGACGACGGCGCTCGATGC CGTGATCCAGCGCGATGTCATGGAATTGATGGTGGAACTGACACAGGCGGAAGGCACCGCCGTGCTGCTGATCAGTCACG ATCTGCCGATGGTAGCGCGTTACACAAACCGCATCGTCGTCATGGAAAAGGGCGTGATCGTCGAAGAAGGACGCACCGCC GATCTGCTCGACGCACCGCAGCGCGCCTATACGAAGAAACTGCTTTCCTCCCTGCCGTTCCGCGGAGAGACGCGGACGAT CGACAAGACCAGGGCGCCGATGGTCTCGGCGCGGGATATCGTCGTCGACTATCCGGGCCGACGGTCGCTGATGAAGAAGG CAAAGCCGAAACGGGCGCTGCATGGCGTCAGCATCGATATCCACGAGGGCGAAGTCGTGGCGCTGGTCGGCGGTTCGGGT TCCGGCAAGACCACGCTCGGGCGCACCATTGCCGGACTGGTCCGGGAGAGCGAAGGCGATATCCGGTTCAAGGGACGCAG CCGCGACGACGACTGGATGGATTATCGGCTGAATTGCCAGATGGTGTTTCAGGATCCTTATTCCTCGCTCGATCCGCGCA TGACCATCCTCGCACTTGTGGAAGAAGCGCTGCGGCTCGTTACCGATCTCGACGCCATGGCTAAGCGCAAGCGTGCCCTG GAGACGCTGGAGGAAGTCGGCCTTGGGGCCGACTATGCCGGGCGCTACCCGCATGAGCTTTCGGGCGGCCAGCGGCAGCG CGTGGCGATTGCGCGCGCCATTGCGCGCCGGCCGAAATTCCTGATCGCCGACGAACCGGTATCGGCGCTTGACGTGACGG TCCGCGCGCAGGTGCTCGAACTCCTATCCGATCTGCAAAAACGTTACGGCTTTTCCTGCCTGTTCATCAGCCATGATCTC GGCGTGGTCGAACAGGTGGCCGATCGCGTCGTCGTCATGCAGGACGGCCGGATCATCGAGGAGGGCGACCGCGATACGGT TTTCGACAGCCCGAAGGAGGCCTATACGCAAAGGCTTCTCTCGGCCATCCCCGCTCTGGACCACAATGCTCAGGGCGGCG TGATCCTCAAATGGCGCCTGGAGAACTGA Protein sequence : MTNRTLLNVRNLTLQVTGTGVQVVKNVSFDIAPGEIFGIVGESGSGKTLATRALISLLPAPIKVIGGSVAYKGRDVLSMN GAQLRQLRGAEIGVVFQEPMTSLNPSMTVGRQLEEGLQLHTRLSQEERRSRILDMLNRVGIRDPAGALTSYPHEFSGGMR QRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTQAEGTAVLLISHDLPMVARYTNRIVVMEKGVIVEEGRTA DLLDAPQRAYTKKLLSSLPFRGETRTIDKTRAPMVSARDIVVDYPGRRSLMKKAKPKRALHGVSIDIHEGEVVALVGGSG SGKTTLGRTIAGLVRESEGDIRFKGRSRDDDWMDYRLNCQMVFQDPYSSLDPRMTILALVEEALRLVTDLDAMAKRKRAL ETLEEVGLGADYAGRYPHELSGGQRQRVAIARAIARRPKFLIADEPVSALDVTVRAQVLELLSDLQKRYGFSCLFISHDL GVVEQVADRVVVMQDGRIIEEGDRDTVFDSPKEAYTQRLLSAIPALDHNAQGGVILKWRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-75 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-75 | 41 |
