Gene Information

Name : pRL110371 (pRL110371)
Accession : YP_771405.1
Strain :
Genome accession: NC_008384
Putative virulence/resistance : Resistance
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1118
EC number : -
Position : 400947 - 401987 bp
Length : 1041 bp
Strand : -
Note : similarity:fasta; SWALL:CYS2_RHIME (SWALL:Q92VJ2); Rhizobium meliloti; sulfate/thiosulfate import ATP-binding protein cysa 2; cysa2; length 367 aa; 345 aa overlap; query 1-345 aa; subject 1-345 aa

DNA sequence :
ATGGAAGTACGCGTTCAAAACATTCGCAAGGAATTCGAGCGTTTTCCGGCGCTGCACGATGTCTCGCTCGACATCCGCTC
CGGCGAGCTGATCGCCCTGCTCGGCCCCTCGGGCTCCGGAAAGACGACATTGCTGCGGCTGATTGCCGGCCTCGAAAGCC
CGACGGAGGGGCTGATCTTCTTCGGCGACGAGGATGCCTCGAAGAAATCGGTGCAGCAGCGCAATATCGGCTTCGTCTTC
CAGCACTATGCTCTCTTCCGCTACATGACGGTGCTCGAAAACGTCTCCTTCGGCCTTAAGGTGAGAAACAGTGCGCGGCG
GCCGCCGAAGGCCGATATCCGCAGGCGGGCGTTGGAACTGCTCGACCTCGTCCAGCTTTCCGGTCTGGAAAAGCGCTACC
CGGCCCAGCTTTCCGGCGGCCAGCGCCAGCGTGTGGCGCTCGCCCGCGCCATGGCCGTCGAGCCGAACGTGCTACTGCTC
GACGAACCCTTCGGCGCGCTCGACGCCCAGGTACGCAAGGACCTGCGCAAGTGGCTGCGCGATATCCACGACCGCACCGG
CCATACCACCGTCTTCGTCACCCACGACCAGGATGAGGCGCTGGAACTTGCCGACCGCGTCGTCGTCATGAGTCAGGGCG
CGATCGAACAGGTGGGCACGCCGGACCAGGTCTACGACAATCCGAATTCGCCCTTCGTCTTCGGCTTCATCGGCCAGTCG
AACTGCCTTGAGGTCGAAATATCAGACGGCGACATTCGCTTCGAAGGCCGCTCGCTCGGCCTCAATGCCGAAGGCGAGCC
GGATGGCACGGCGCAGCTCTATTTCCGCCCGCATGACGTCAGGCTCTGCGAATCAGCTGAAAACTGTATCGCCGGCCAGC
CGGTTTCCAGCCGCCGCGTGGCTGGTACCCGCCATATCGAATTGGATATCGGCGCCGATCGCCCGCATATCGAGATCGAA
TTGCCGCCGAGCGAGGCCGACAGGCTCGACCGCAACCGGGTGGCTTTCAAGCCGACCCGCTGGAAACTGTTCCGCAGTTG
A

Protein sequence :
MEVRVQNIRKEFERFPALHDVSLDIRSGELIALLGPSGSGKTTLLRLIAGLESPTEGLIFFGDEDASKKSVQQRNIGFVF
QHYALFRYMTVLENVSFGLKVRNSARRPPKADIRRRALELLDLVQLSGLEKRYPAQLSGGQRQRVALARAMAVEPNVLLL
DEPFGALDAQVRKDLRKWLRDIHDRTGHTTVFVTHDQDEALELADRVVVMSQGAIEQVGTPDQVYDNPNSPFVFGFIGQS
NCLEVEISDGDIRFEGRSLGLNAEGEPDGTAQLYFRPHDVRLCESAENCIAGQPVSSRRVAGTRHIELDIGADRPHIEIE
LPPSEADRLDRNRVAFKPTRWKLFRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-39 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRL110371 YP_771405.1 putative ATP-binding component of ABC transporter BAC0604 Protein 1e-41 41