Gene Information

Name : pRL110144 (pRL110144)
Accession : YP_771177.1
Strain :
Genome accession: NC_008384
Putative virulence/resistance : Unknown
Product : putative transposon/insertion element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 155328 - 155594 bp
Length : 267 bp
Strand : -
Note : similarity:fasta; SWALL:YIA3_RHISP (SWALL:P17985); Rhizobium sp; insertion element ISR1 hypothetical 10 kDa protein a3; length 88 aa; 88 aa overlap; query 1-88 aa; subject 1-88 aa; similarity:fasta; SWALL:Q6N5J2 (EMBL:BX572602); Rhodopseudomonas palustris

DNA sequence :
ATGAAGCGCAATCGTTTCACGGACGAACAGATCATCGGCATATTGAAGGAGCACGAGGCAGGCACGCCGGTCTCGGAGCT
TTGCCGCAAGCATGGCGTCAGCGATGCTAGCATCTATAAATGGAAGGCCAAGTTCGGCGGCATGGAGGTGTCCGAGGCCA
AGCGGCTGAAGACGCTTGAGGACGAGAACACGAAGCTGAAACGGCTTCTGGCGGATGCGATGCTCGACAATGCTGCCTTG
AAAGACCTTTTGGGAAAGAAGTGGTGA

Protein sequence :
MKRNRFTDEQIIGILKEHEAGTPVSELCRKHGVSDASIYKWKAKFGGMEVSEAKRLKTLEDENTKLKRLLADAMLDNAAL
KDLLGKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-18 65
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-18 65
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-18 63
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-18 63
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 5e-16 53
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-14 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-14 52