Gene Information

Name : pRL70036 (pRL70036)
Accession : YP_770778.1
Strain :
Genome accession: NC_008382
Putative virulence/resistance : Unknown
Product : insertion sequence IstB family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 32856 - 33614 bp
Length : 759 bp
Strand : +
Note : similarity:fasta; with=UniProt:ISTB_BACST (EMBL:BSIS5376); Bacillus stearothermophilus.; Insertion sequence IS5376 putative ATP-binding protein.; length=251; id 35.294; 238 aa overlap; query 10-247; subject 5-242; similarity:fasta; with=UniProt:Q8U6E6_AGR

DNA sequence :
ATGAGCACCGAAGTCCCGGAGATCCTGCTGTCCCATTATCTCAAAATCCTCAAACTTCCGACCTTCCAGCGCGAGTATCA
AAAGCTAGCACGGCTATGTGCCACCGAGGGCGTCGATCATGTCGGATACCTCACCCGGCTTTCCGAACGGGAGATGATCG
AACGGGATCGCCGCAAGGTCGAGCGCCGCATCAAGGCGGCCAGGTTCCCTGTCGTCAAGAGCCTCGACAGCTTCGACTTC
GCCGCCATCCCGAAGCTCAACAAGATGCAGGTGCTGGAACTGGCGCGATGCGAATGGATCGAGCGTCGCGAGAATGTCAT
TGCGCTCGGTCCAAGCGGTACAGGCAAGACCCCTGTTGCACTCGGCCTCGGCCTGGCCGCATGCCAGAAGGGCCTCTCGG
TAGGGTTCACGACCGCCGCCGCGCTGGTCAGCGAGATGATGGAGGCGCGCGACGAAAGGCGTCTGCTCCGTTTCCAGAAG
CAGATGGCCGCCTACCAGCTCCTCATCATCGATGAACTGGGCTTCGTGCCGCTCTCCAAAACCGGCGCGGAGTTACTGTT
CGAGCTGATCTCGCAACGCTACGAACGCGGTGCCACCCTGATCACCAGCAATCGTCCGTTTGACGAATGGACGGAGACCT
TGGGATCCGAGCGTCTCACTGGCGCTCTTCTCGATCGCATCACCCACCACGTCAACATCCTCGAGATGAACGGCGACAGC
TATCGTCTCGCTCAAAGTCGAGCCCGCAAGCCCGGCTGA

Protein sequence :
MSTEVPEILLSHYLKILKLPTFQREYQKLARLCATEGVDHVGYLTRLSEREMIERDRRKVERRIKAARFPVVKSLDSFDF
AAIPKLNKMQVLELARCEWIERRENVIALGPSGTGKTPVALGLGLAACQKGLSVGFTTAAALVSEMMEARDERRLLRFQK
QMAAYQLLIIDELGFVPLSKTGAELLFELISQRYERGATLITSNRPFDEWTETLGSERLTGALLDRITHHVNILEMNGDS
YRLAQSRARKPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-35 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-34 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-35 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-35 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-35 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-35 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 6e-35 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-35 41
unnamed CAA21402.1 - Not tested HPI Protein 6e-35 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 6e-35 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-35 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 6e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRL70036 YP_770778.1 insertion sequence IstB family protein VFG1606 Protein 3e-35 41
pRL70036 YP_770778.1 insertion sequence IstB family protein VFG1663 Protein 7e-35 41
pRL70036 YP_770778.1 insertion sequence IstB family protein VFG1515 Protein 3e-35 41
pRL70036 YP_770778.1 insertion sequence IstB family protein VFG1627 Protein 3e-35 41