|
Name : pRL100453 (pRL100453) Accession : YP_770729.1 Strain : Genome accession: NC_008381 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 467953 - 469989 bp Length : 2037 bp Strand : - Note : similarity:fasta; SWALL:Q98FJ4 (EMBL:AP003002); Rhizobium loti; transketolase; length 683 aa; 672 aa overlap; query 1-669 aa; subject 9-675 aa DNA sequence : ATGCCGGACACCTCACAAGCTCCGAAGACATTCCCAGCTCCCAAGGATCAGCGCCTCCGGGATCTCGCCGACTGCATCCG TTTCCTCTCCATGGATGCGGTTCAACAGGCAAAGAGCGGTCATCCCGGCATGCCGATGGGCATGGCCGACATCGCGGCGG TGCTTTTCTCCGAGTTTCTGAAGTTCGATGCCGCCGATCCCTATTGGTTCGATCGCGACCGCTTCGTCATTTCCAACGGT CACGGCTCAATGTTGCTCTATAGCCTGCTCTATCTGACGGGCTACAAGGACATGACCATCGAAGAGATCAAACGCTTCCG CCAGATCGACAGCCGCACGGCGGGTCACCCCGAATATCGCCACGCCACCGGCATCGAAACGACCACCGGTCCGCTGGGGC AGGGGATTGCAAATTCTGTCGGTCTCGCACTCGGCGAGCGGATCATGAATGCCTCGTTCGGCGACAATCTGGTCAATCAC CACACCTATGTCTTCCTGGGTGACGGCTGCCTGATGGAAGGCATCAGCCACGAGGCGATATCGCTTGCCGGACATCTGAA GCTCGGCAAGCTCATCGCCTTCTGGGACGACAACTCGATCTCGATCGACGGTGCGACCAGCCTTGCTGAATCCGATGACC ATCCGGCGCGTTTCCGCGCGGCGAACTGGCACGTCCAGCAAATCGACGGTCACGATACCGATGCGATCCGCGCCGCAATC ATCGAAGCGCAGAAGGTGACGGATCGGCCGTCGATGATTGCCTGCAAAACCATCATCGGCTTCGGTTTCCCGACCAGGGC GGGAACGCAGAAGGCCCATAGCGACGCGCCTGGTGAAGACGAGATCGCCGGCGCCCGCAAGATCCTCGGTTGGGCATCGC CTCCCTTCGAAATACCGGAAGCGCTTCTCAATGACTGGCGAAAGATCGGCGCGAAAGGCGGGCCGGCGCGGATGGCCTGG GCGGTCCGTGTCCAGACTGCTTCGCCGGACAAGCGAGACGATTTTGAGCGGCGCATGAACGGAGAACTGCCGTCCGGTTG GCGCGCTGCCATCGCTGCGGCAAAGCAGGAACTTTCAGGTTCCGAAAAGGATCTCGCCACCCGTCAGGCGAGCGGCATCG TGCTCAACCATCTCTTCGATGCGATCCCCGAGCTTCTTGGCGGCTCGGCGGATCTGACGCCTTCAAACAACACCAAGGCC AAGAACCAGGTCGAGATCAAGCCCGGGGAATATGGCGGATCCTATCTCCACTATGGTGTCCGCGAGCACGGCATGGCGGC GGCGATGAACGGTTTGGCGCTGCATGGGGGGCTTATTCCCTATGGCGGCACGTTCCTGACATTTTCCGACTATTGCCGCC CGGCGATCCGGCTCGCGGCGATAATGGAGGTGCGTTCGATCTTCGTGATGACACATGACTCGATCGGATTGGGCGAGGAC GGGCCGACACATCAGCCGATCGAACATCTGAGCGCATTGCGCGCCATTCCCCGGCTCGCTGTCTATCGCCCGGGCGATCC GATCGAAACGGCCGAGTGCTGGGAGGCGATCATGGATGCGCCGCGGCAGGCAGCACTGATTGCTCTGTCCCGCCAGCCAA TGCCGCTTTTACGCCGCGGCCCGTCCGACGAGAACCGCTCGGCAAGGGGAGCCTACGTTCTCCAGGAAGCTGAAGGCGGC GAGCGGCAACTGACGATCCTTGCCTCCGGCTCGGAACTGAATCTGGCGGTCGAAGCCCGCTCGGTGCTGCAGGACGAGGG TATTCGCACGGCCGTTGTTTCGATGCCGTGCAGGCTGCTGTTCGAGAAGCAGGATGCCGCCTACAAGAAGTCGGTGCTGG GCGGCAGCCGAGCCAGGGTCGCCGTCGAAGCAGCCGTGCGGGATTCCTGGGACCGCTATCTCGGCTTGGACGGCGTATTC GTCGGCATGCATGAATTCGGAGCATCCGGCAAAATCGATGACGTTTACACGAAGTTCGATATCACCACAGACGCAGTGAT ACGTGCCGGACGTGAGGTGGCAGGAAAGCAGGCCTAG Protein sequence : MPDTSQAPKTFPAPKDQRLRDLADCIRFLSMDAVQQAKSGHPGMPMGMADIAAVLFSEFLKFDAADPYWFDRDRFVISNG HGSMLLYSLLYLTGYKDMTIEEIKRFRQIDSRTAGHPEYRHATGIETTTGPLGQGIANSVGLALGERIMNASFGDNLVNH HTYVFLGDGCLMEGISHEAISLAGHLKLGKLIAFWDDNSISIDGATSLAESDDHPARFRAANWHVQQIDGHDTDAIRAAI IEAQKVTDRPSMIACKTIIGFGFPTRAGTQKAHSDAPGEDEIAGARKILGWASPPFEIPEALLNDWRKIGAKGGPARMAW AVRVQTASPDKRDDFERRMNGELPSGWRAAIAAAKQELSGSEKDLATRQASGIVLNHLFDAIPELLGGSADLTPSNNTKA KNQVEIKPGEYGGSYLHYGVREHGMAAAMNGLALHGGLIPYGGTFLTFSDYCRPAIRLAAIMEVRSIFVMTHDSIGLGED GPTHQPIEHLSALRAIPRLAVYRPGDPIETAECWEAIMDAPRQAALIALSRQPMPLLRRGPSDENRSARGAYVLQEAEGG ERQLTILASGSELNLAVEARSVLQDEGIRTAVVSMPCRLLFEKQDAAYKKSVLGGSRARVAVEAAVRDSWDRYLGLDGVF VGMHEFGASGKIDDVYTKFDITTDAVIRAGREVAGKQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-156 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-157 | 49 |
