Gene Information

Name : pRL100426 (pRL100426)
Accession : YP_770702.1
Strain :
Genome accession: NC_008381
Putative virulence/resistance : Resistance
Product : ABC transporter protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 443281 - 444045 bp
Length : 765 bp
Strand : -
Note : similarity:fasta; SWALL:Q8U816 (EMBL:AE009356); Agrobacterium tumefaciens str. C58; ABC transporter,nucleotide binding/ATPase protein; length 254 aa; 254 aa overlap; query 1-254 aa; subject 1-254 aa

DNA sequence :
ATGACCATGTCAGTTTCAGCACAGGAATTGCAGACGATCCGGCTTTCGCAGGTCTGCAAGAGCTACGGCGACTATCCGGT
CCTGAAGGACATCGATGCGCAGGTGACACGCGGCGAAGTCGTGGTCATCTGCGGGCCGTCCGGGTCGGGAAAATCGACGC
TGATCCGCACGATCAATCGCCTCGAGGAGATCAACAGCGGGTCGATCACGCTCGACGGGCAAAACATCCACGCCGCGATG
CGGGCGAAGGAACTCAATGCGCTACGCAGCCGGATCGGCTTCGTATTTCAGAACTTCAACCTGTTTCCGCATCTTTCGGT
GGTCGAAAACGTCTCGATGTCGCCGATCCGGGTGAAAGGCGTGGCGCCGGATGTTGCAGAGGACAAGGCCCTCAAGCTTC
TCGATCGGGTCGGCCTTGCCGACAAGGCGCGGGCCTATCCCGGTCAACTCTCGGGCGGCCAGCAGCAGCGGGTGGCAATC
GCCCGCGCCCTTGCCATGGAACCGCCGGTGATGCTGTTCGACGAGCCGACCAGCGCGCTCGATCCTGAAATGGTCGGCGA
AGTGCTGGCCGTCATGAAGAGCCTGGCGTCCGAAGGCATGACCATGCTCTGCGTCACCCATGAAATGGGTTTCGCGCGCG
ACGTCGCGGATCGGGTCTGGTTCATCGATGCCGGCCAGATCCTCGAAATGGCGACCCCCGAGGAATTCTTCAACAATCCA
CGCCATCCCCGGGCTCAGCGTTTCCTGGCTGATCTCAGGCATTGA

Protein sequence :
MTMSVSAQELQTIRLSQVCKSYGDYPVLKDIDAQVTRGEVVVICGPSGSGKSTLIRTINRLEEINSGSITLDGQNIHAAM
RAKELNALRSRIGFVFQNFNLFPHLSVVENVSMSPIRVKGVAPDVAEDKALKLLDRVGLADKARAYPGQLSGGQQQRVAI
ARALAMEPPVMLFDEPTSALDPEMVGEVLAVMKSLASEGMTMLCVTHEMGFARDVADRVWFIDAGQILEMATPEEFFNNP
RHPRAQRFLADLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRL100426 YP_770702.1 ABC transporter protein NC_012469.1.7686878. Protein 1e-31 43