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Name : gabD (pRL100252) Accession : YP_770532.1 Strain : Genome accession: NC_008381 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 256447 - 257901 bp Length : 1455 bp Strand : + Note : NADP+; similarity:fasta; SWALL:GABD_ECOLI (SWALL:P25526); Escherichia coli; succinate-semialdehyde dehydrogenase [NADP+]; gabD; length 482 aa; 481 aa overlap; query 1-481 aa; subject 1-481 aa; similarity:fasta; SWALL:Q7CUF3 (EMBL:AE008260); Agrobacterium DNA sequence : ATGAAGCTCAATGATCCCTCGCTGTTCCGTCAGGCATGCCCCATCGCCGATCGCTGGATCGAAGCGGAAGGCCGCAAGGC GGCCACGGTCCGCAATCCGGCGACAGGCGAGCCGCTGGGGGTGGTGCCTGACCTCGGCGCCGCGGAAACGGAAGATGCCA TCCGCGCCGCGGTTATCGCCCAGAAGCTTTGGGCGAAGAAGACCGCCGGGGAGCGCGCCGCCGTTCTCAAGAAATGGCAC CGGCTGATGATCGAAAATCGCGACGATCTGGCGATGATCCTGACGCTGGAGCAGGGAAAACCGCTCGCCGAAGCCAAAGG AGAGATCACCTATGGTGCGAGCTTCATCGAATGGTTCGCCGAGGAGGCGAGACGCATCAACGGCGAGGTCGTACCAGGAC ATCAGCCGGACAAGCGGATCCTCGTCCTTCGCCAGCCGGCAGGCGTAGTGGCGGCGATCACGCCCTGGAACTTTCCGAAC GCGATGATCACCCGCAAGATTGGCCCCGCGCTTGCCGCCGGCTGTGCCGTCGTTCTCAAGCCGGCGCTGCAGACGCCATT CTCCGCCATTGCGATCGCCGTTCTCGGTGAGCGCGCCGGCCTGCCGCCGGGGCTTCTCAACATCGTCACGGGTGACGCAG CGGCAATTGGCGGGGTGCTGACGGCAAGCCGTGACGTTCGGGTTCTGACATTCACCGGCTCCACCCGGACGGGCGAACTG CTTTACCGGCAATGTGCGCCGACGATCAAAAAGCTCGGCCTCGAGCTTGGCGGCAATGCACCCTTCATCGTGTTCGACGA CGCCGATCTCGACGCTGCGGTCGAAGGCGCGCTCATCGCCAAGTTCCGCAACAACGGCCAGACCTGTGTTTGCGCCAATC GCCTTTATGTCCAGGACGGCGTCTACGAGGCGTTTGCCGCCAAGCTCGCCGCGGCGGTTTCGGGCTTGAAGGTCGGCAAC GGTCTCGACCGTGACGTCGTGCTTGGCCCGCTGATCGACGACAATGCCGTCGCCAAGGTCGAAAGCCATATCCGCGATGC CGTTTCAAAGGGTGCCGGGATCGTTTCAGGCGGCAAACGCCACGCGCTCGGCGGCCATTTCTTCGAGCCGACGATCCTGC GCGACGTTGCTGCCGGCATGCAGGTCGCGCGCGAGGAAACCTTCGGGCCGCTTGCACCGCTTTTCCGTTTCCGCGACGAA GAAGACGTCATCGAACAGGCAAACGACACCGAATTCGGACTTGCTTCGTATTTTTACGCCCGCGATCTGTCGCGGGTATT TCGTGTGGCCGAAGCGCTCGAATATGGCATGGTCGGCGTCAATACCGGTCTCGTCTCGACGGCTGAGGCCCCGTTCGGCG GCGTGAAGATGTCAGGTCTCGGTCGCGAAGGGTCAAGGCACGGATTGGACGAATATACCGAACTTAAATATGTATGCCTG GGTGGTATTGCCTGA Protein sequence : MKLNDPSLFRQACPIADRWIEAEGRKAATVRNPATGEPLGVVPDLGAAETEDAIRAAVIAQKLWAKKTAGERAAVLKKWH RLMIENRDDLAMILTLEQGKPLAEAKGEITYGASFIEWFAEEARRINGEVVPGHQPDKRILVLRQPAGVVAAITPWNFPN AMITRKIGPALAAGCAVVLKPALQTPFSAIAIAVLGERAGLPPGLLNIVTGDAAAIGGVLTASRDVRVLTFTGSTRTGEL LYRQCAPTIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRLYVQDGVYEAFAAKLAAAVSGLKVGN GLDRDVVLGPLIDDNAVAKVESHIRDAVSKGAGIVSGGKRHALGGHFFEPTILRDVAAGMQVAREETFGPLAPLFRFRDE EDVIEQANDTEFGLASYFYARDLSRVFRVAEALEYGMVGVNTGLVSTAEAPFGGVKMSGLGREGSRHGLDEYTELKYVCL GGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-144 | 62 |
