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Name : gabD (pRL100134) Accession : YP_770416.1 Strain : Genome accession: NC_008381 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 129385 - 130836 bp Length : 1452 bp Strand : + Note : NADP+; similarity:fasta; SWALL:GABD_ECOLI (SWALL:P25526); Escherichia coli; succinate-semialdehyde dehydrogenase [NADP+] (ssdh); gabD; length 482 aa; 479 aa overlap; query 2-479 aa; subject 1-479 aa; similarity:fasta; SWALL:Q8VPD7 (EMBL:AY052389); Agrobac DNA sequence : ATGGTCAATCTAAAAAAAACGGAACTCCTGCGCGATCGATGCCTGATAGATGGCAAATGGGTTGCCGGCTCTCAGAACAA CATCGCCGTCAAGAACCCAGCGACGGGGGAGATTGTCGGCACCGTTCCTTCACTGGAGGCGGGAGATGTTGAGCAGGCGG TCGTAGCGGCCGAAGTTGCCTTCCGTTCGTGGAGCGCGCTTGCAGCGAAGGAAAGAGCGGCCGTCCTGCTCCGCTGGTTC TATCTGATAATAGAAAACGCGGACGATCTGGCCGCGCTGATGACGGCTGAACAGGGCAAGCCGCTGTCCGAAGCCAGGGG GGAAATGCTTTACGCCGCCTCCTTTATCGAATGGTTTGCCGAGGAGGCAAAGAGGGTCTATGGGGACATCATACCCGCAC CAACCACCGACAAGCGCATCCTGGTTTTCAAGCAGCCGATCGGTGTCTGCGCCGCAATCACGCCGTGGAACTTCCCGGCA GCAATGATCACACGCAAGGCGGCGCCTGCGCTGGCTGCCGGTTGCACCATGGTGGTTAAGCCGGCCGAGCAGACACCCCT CACGGCGCTGGCTCTCGGCGTACTAGCCGAACAGGCGGGTATTCCCGCCGGCGTTTTCCAGATTGTGACAGGAAAATCAC GCGAGATCGGCAAGGTGCTGACGGAAAGCGACATAGTCAAAAAACTGTCTTTCACCGGGTCGACCGAGGTGGGGCGAATT CTCATGGCGCAGTCTGCGCCGACGATAAAGAAACTGTCCATGGAGCTCGGCGGCAACGCACCCTTCATCGTTTTCGACGA CGCCGACCTCGATGCCGCCGTCGACGGTGCCGTCGCGTCGAAATACCGTAATGCTGGTCAGACCTGTGTCTGCACAAACC GTATCTACGTGCAGTCGGGTGTTTACGATGTCTTCGCTGAAAAGCTTGCGGCGAAGGTTTCTGCGCTGAAAGTCGGTGAA GGCACGCAGGTGGATGTAACAATTGGACCGCTGATTGATGCTGAGGCCATCGCCAAGATCGAGGACCATATTAGCGATGC GATCGGGAAGGGCGCGAAAGTGGTCGTAGGTGGCAAGCGACACAGCCTCGGCGGGAGATTCTTCGAACCGACTGTCCTGA CAGGAGCGACACAAGCGATGAAGATCGCCCGCGAGGAGACCTTCGGGCCAGTCGCGCCTCTCTTCCGCTTTGAGACAGAG GAAGAGGCGCTCGCTATGGCCAACGACACGGAATTCGGATTGGCTGCCTATTTTTATACTGAAAACATCCGCCGGACATG GCGAGTGGCCGAAGCGCTGGAATACGGCATGGTGGGTCATAACACCGGTCAGATCTCGAACGAGGTGGCGCCATTTGGCG GCGTCAAGCAGTCCGGCCTCGGACGGGAAGGCTCCCGTTACGGAATCGATGACTATCTGGAAATCAAATATCTGTGCTCG GCCATCGCGTAA Protein sequence : MVNLKKTELLRDRCLIDGKWVAGSQNNIAVKNPATGEIVGTVPSLEAGDVEQAVVAAEVAFRSWSALAAKERAAVLLRWF YLIIENADDLAALMTAEQGKPLSEARGEMLYAASFIEWFAEEAKRVYGDIIPAPTTDKRILVFKQPIGVCAAITPWNFPA AMITRKAAPALAAGCTMVVKPAEQTPLTALALGVLAEQAGIPAGVFQIVTGKSREIGKVLTESDIVKKLSFTGSTEVGRI LMAQSAPTIKKLSMELGGNAPFIVFDDADLDAAVDGAVASKYRNAGQTCVCTNRIYVQSGVYDVFAEKLAAKVSALKVGE GTQVDVTIGPLIDAEAIAKIEDHISDAIGKGAKVVVGGKRHSLGGRFFEPTVLTGATQAMKIAREETFGPVAPLFRFETE EEALAMANDTEFGLAAYFYTENIRRTWRVAEALEYGMVGHNTGQISNEVAPFGGVKQSGLGREGSRYGIDDYLEIKYLCS AIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-138 | 62 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 8e-78 | 43 |
