Gene Information

Name : RL0810 (RL0810)
Accession : YP_766419.1
Strain : Rhizobium leguminosarum 3841
Genome accession: NC_008380
Putative virulence/resistance : Virulence
Product : polysaccharide synthesis
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 878868 - 880940 bp
Length : 2073 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGAAAATACCCCCACTGAGACGCCGCGCTCAGGATGGTTCTTAATGCCGATGCAAGCGCTCGTCGCCCCTCTGCT
GGCGATGCCGCGGGTTGCCAAACGCGCTCTGGCCTTGCTGCTGGATTCCAGCTTTTGTGTTCTGACCATCTGGCTCGCCT
ATTGCTTCCGCCTCAACGAATGGACGGTGCTGACCGGTGTGCAGTGGCTGCCGGTCTTCGTTTCACTGTGCATGGCCCTT
CCCATCTTCATCGTCATGGGCATGTATCGGGCGATCTTCCGTTATGCCAATATGGCTGCTTTCATAACTGTTCTGAAGGC
GATTGCGATCTACGGCGTCGCCTTTATGACGATATTTACAGCCCTCAGCGTCCCCGGTGTTCCGAGAACCGTCGGCATCC
TCCAGCCCTTCCTGCTGTTGATTGCGATCGGGCTGTCGAGGTTAAGTATCCGCTACTGGCTCGGGGATGCCTACCAGCGC
ATCCTTCACAAGAATATGCTCGCCAAGGTGCTGATCTACGGGGCAGGGACGGCCGGGCGGCAATTGGCCGGTGCCTTGAT
CAACAGTGCCGAACTCAATGTCGTCGGCTATCTGGATGATGATCCGCGTCTCAAGGGCGGCGTCATGGGTGGTTTGCCGA
TCTACGACCCCTCGGATCTTCCGGTGCTTGCCGAATCTCTCGGCGTGCACAACGTGCTTCTTGCTCTTCCCTCCGCATCG
CGGCAGCGTCGCAACGAAATCCTGGAGCACATCCGTAAAGCCAGGGTCAATGTTCGCACGTTGCCGGATCTCACTGCCCT
GGCTCAGGGACGCATCGCCGTCTCCGACATCCGAGAGCTGGAGATCGAAGATCTGCTCGGAAGAGAAGCGGTCGCGCCGC
GCCAGGAGCTACTCGACAAGTCGATGCGCAACAAGGTGGTGATGGTCACCGGTGCCGGCGGCTCGATCGGCGGCGAGTTA
TGCCGTCAGATTTTGCGCACCGGGCCTTCCAGCCTCATCCTCATCGATCAGAACGAGTTTGCGCTTTATAATATCCATGC
CGAATTGCAGAAGCTGGCCGAACTGTACAAGCATGAAAATATGCAGATCGTTCCGATTCTGTGTTCTGTCCGCGATCAGG
ATCGCATGGAACATGTCATGCAGAGCTGGCGACCTCAGACACTCTATCATGCAGCCGCTTACAAGCATGTTCCCCTTGTC
GAACACAATGCCGTGGAAGGCATCAAGAACAATGTGATGGGTACGCTGGTCGCGGCGCGCGCGGCGAATAAATGCGGCGT
CTCGAATTTCGTGCTGATCAGTACAGACAAAGCCGTGCGTCCGACAAATGTGATGGGCGCCAGCAAGAGGTTGGCAGAGA
TGGTTCTGCAGGCGCTCGCAGCAGAATCGGCGACCGACAGAATGCGAACGAATTTCTCCATGGTCCGTTTCGGAAACGTC
CTCGGCTCCTCCGGATCCGTCGTGCCGCTGTTTCGGCAGCAGATCAAGGAGGGCGGCCCGGTGACACTGACACATCCTGA
TATAACCCGCTATTTCATGACCATTTCGGAGGCTTCTCAACTCGTCATTCAGGCCGGCGCGATGGCGGAGGGGGGAGATG
TCTTCCTGCTCGACATGGGAGAGCCGGTTCGCATCGCCGATCTCGCCCGCAAGATGGTCGAGCTTTCCGGGCTGGCCGTC
CGCGACGAAGACAATCCCGAAGGCGATATCGAGCTGTCCGTTACCGGTCTTCGTCCCGGCGAGAAGCTCTTTGAAGAGCT
GTTGATCGGGGATAATCCGAAAACAACCGAACATCCCCGGATTATGAAGGCGCGCGAGGATTTCCTGTTGTGGCCGGAGC
TTTTGAAAAAGCTCAACGCGCTCAATGCGGTATTGGATCGGAACGATATGATCGCTGCACGTGCGATACTAGCGAAGCTT
GTTTCCGGCTATTCGTCAACCGGCGAGGTCTCGGATCTGGCTTTCACCGGCACCTTAAAACCAACAACGCGGCTTAAGAC
ACCCAAGGTCGGCGAGCCCACGTCGACGAATGTTGCTGCGAGTGACAAAGCGCGGTGGGTGCAGCAGCCGTAA

Protein sequence :
MPENTPTETPRSGWFLMPMQALVAPLLAMPRVAKRALALLLDSSFCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSLCMAL
PIFIVMGMYRAIFRYANMAAFITVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQPFLLLIAIGLSRLSIRYWLGDAYQR
ILHKNMLAKVLIYGAGTAGRQLAGALINSAELNVVGYLDDDPRLKGGVMGGLPIYDPSDLPVLAESLGVHNVLLALPSAS
RQRRNEILEHIRKARVNVRTLPDLTALAQGRIAVSDIRELEIEDLLGREAVAPRQELLDKSMRNKVVMVTGAGGSIGGEL
CRQILRTGPSSLILIDQNEFALYNIHAELQKLAELYKHENMQIVPILCSVRDQDRMEHVMQSWRPQTLYHAAAYKHVPLV
EHNAVEGIKNNVMGTLVAARAANKCGVSNFVLISTDKAVRPTNVMGASKRLAEMVLQALAAESATDRMRTNFSMVRFGNV
LGSSGSVVPLFRQQIKEGGPVTLTHPDITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELSGLAV
RDEDNPEGDIELSVTGLRPGEKLFEELLIGDNPKTTEHPRIMKAREDFLLWPELLKKLNALNAVLDRNDMIAARAILAKL
VSGYSSTGEVSDLAFTGTLKPTTRLKTPKVGEPTSTNVAASDKARWVQQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-84 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RL0810 YP_766419.1 polysaccharide synthesis VFG0029 Protein 2e-111 49