Gene Information

Name : xerD (RL4354)
Accession : YP_769925.1
Strain : Rhizobium leguminosarum 3841
Genome accession: NC_008380
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4623166 - 4624119 bp
Length : 954 bp
Strand : +
Note : -

DNA sequence :
ATGGTGGATCTCGGCCGCGTCCATGTGGAATCCTTCCTGGAGATGATGAGCGCCGAGCGAGGTGCTGCCGCCAACACGCT
GCAATCCTATGAACGCGATCTCGACGACGTCCGCTCCTTCCTGACGGAGCGCAGCATACGGCTGACCGAAGCCGCCTCCA
CCGATCTCGCCGCCTATCTCTCCTCGCTCGCCCGAAAGGGCTTCAAACCCTCGTCCCAGGCGCGCCGGCTTGCCGCCATG
CGGCAATTCTACAAGTTCCTCTACGCCGAGGGACTGAGGGCCGACGACCCCACAGGCATTCTCGACGCACCGAAGAAGGG
CCGTCCGCTGCCGAAGACGATGGGCGTCGAAGAGGTCGGCAGGCTGCTTTCGCGGGCGGAGGCCGAAGCCGAGGATCCGG
CTCCGGGCCAGTTGCAGCGCCTGCGCATGCTGGCGCTGCTGGAACTGCTCTATGCCACCGGAATGCGGGTCAGCGAACTC
GTCTCGCTTCCCGCCCGCGTGCTCGATCAGGAAGGCCGTTTCCTGATGATCCGCGGCAAGGGCAACAAGGAGCGGCTGGT
GCCGCTGTCGCAATCGGCGATATCAGCCCTGAAATCCTACGGACGCCTGCTGGCGGTGGAAAATGCAGCCGTGAAGGAAC
CGCAGGAAAGCCCCTGGCTGTTTCCTTCCGCCTCGAAGGAGGGATACCTGCCGCGCCAGGTTTTCGCCCGCGACCTCAAG
AACCTTGCGATCCGCGCCGGTCTGACGCCGTCGCTGATCTCGCCGCATGTCATGCGCCACGCCTTTGCCAGCCACCTGCT
TGCCAACGGCGCCGATCTGCGCGTCGTGCAGGAACTCCTCGGCCATTCGGACATTTCGACCACGCAGATTTACACACATG
TGCTCGAAGAGAGGCTGCAGCAGCTTGTCCAGACGCATCACCCCCTTGCCAAACAGGCGAAAAAGCACGAATAG

Protein sequence :
MVDLGRVHVESFLEMMSAERGAAANTLQSYERDLDDVRSFLTERSIRLTEAASTDLAAYLSSLARKGFKPSSQARRLAAM
RQFYKFLYAEGLRADDPTGILDAPKKGRPLPKTMGVEEVGRLLSRAEAEAEDPAPGQLQRLRMLALLELLYATGMRVSEL
VSLPARVLDQEGRFLMIRGKGNKERLVPLSQSAISALKSYGRLLAVENAAVKEPQESPWLFPSASKEGYLPRQVFARDLK
NLAIRAGLTPSLISPHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQQLVQTHHPLAKQAKKHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-39 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-39 42