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Name : clpB (RL4279) Accession : YP_769854.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Virulence Product : chaperone ClpB (heat-shock protein) Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4549225 - 4551825 bp Length : 2601 bp Strand : - Note : - DNA sequence : ATGAATATCGAGAAATATTCGGAGCGGGTGCGCGGTTTCATCCAGTCCGCCCAGACCTATGCGCTGGCGCAGGGTCACCA GCAATTTACGCCGGAACATGTGCTGAAAGTCCTGCTCGACGACGATCAGGGCATGGCGGCGTCGCTGATCGAGCGCGCCG GCGGCGATGCCAAGGCCGCCCGCCTGGCCAATGACGCGGCTCTCGCCAAATTGCCCAAGATCTCCGGCGGCAACGGCAAC ATCTATCTGGCACAACCGCTCGCCAAGGTGCTTTCGACCGCCGAAGAAGCGGCGAAGAAGGCCGGCGACAGCTTCGTCAC GGTGGAACGCCTGTTGCAGGCGCTGTCGATCGAATCCTCGGCCTCGACCTTTTCGACGCTGAAGAACGCCGGCGTGACGG CCCAGGGCCTCAACCAGGTGATTAACGACATCCGCAAGGGTCGGACGGCGGATTCCTCCAATGCCGAGCAGGGTTTCGAC TCGCTGAAGAAGTTCGCACGCGATCTTACCGCTGAAGCCCGGGAGGGCAAGCTCGACCCGGTGATCGGCCGCGACGACGA AATCCGCCGCACGATCCAGGTGCTTTCGCGCCGGACGAAGAACAATCCTGTGCTGATCGGCGAACCCGGCGTCGGCAAGA CGGCGATCGTCGAGGGCCTGGCGCTGCGAATCGTCAACGGTGACGTGCCGGAATCGCTCAAGGACAAGAAGCTGATGGCG CTCGACATGGGCGCGCTGATTGCCGGTGCGAAATATCGCGGCGAATTCGAGGAGCGGTTGAAGGCCGTGCTCAACGAGGT CCAGGCGGAAAACGGCGAGATCATCCTGTTCATCGACGAGATGCATACGCTGGTCGGCGCCGGCAAGGCGGATGGGGCGA TGGATGCCTCGAACCTCCTGAAGCCGGCTCTTGCCCGCGGTGAGCTGCATTGCGTCGGCGCGACCACGCTCGACGAATAC CGCAAACATGTCGAGAAGGATCCGGCCCTTGCCCGCCGCTTCCAACCCGTCGTCGTCGATGAACCGACGGTCGAAGACAC AATCTCGATCCTGCGCGGCCTGAAGGAAAAATACGAGCAGCATCACAAGGTGCGCATCGCCGATGCGGCGCTGGTGGCCG CAGCGACACTTTCCAACCGCTATATCACCGACCGTTTCCTGCCCGACAAGGCCATCGACCTGATGGACGAGGCGGCAGCG CGGTTGCGCATGCAGGTGGATTCCAAGCCGGAAGAGCTCGACGAACTCGACCGCCGCATCATGCAGCTGAAGATCGAGCG CGAAGCGCTGAAAAAGGAAACGGACGTCGCGTCCGCCGACCGTCTGAAGCGACTTGAAACCGAAGTGACCGATCTCGAGG AGCAGGCCGATGCGCTGACTGCCCGCTGGCAGGCGGAAAAGCAGAAGCTCGGCCTTGCCGCCGATCTCAAGAAGCAGCTC GACGATGCCCGCAACGAACTGGCGATCGCGCAGCGCAAAGGCGAATTCCAGCGTGCCGGCGAGCTGACCTACGGTGTCAT TCCGGATCTCGAAAAGCAGCTCGTCGATGCTGAGAAGCAGGATGGCGACCGCGGCGCGATGGTGCAGGAGGTGGTCATCC CCGACAACATCGCCCATGTCGTGTCCCGCTGGACCGGCATTCCGGTCGACAGGATGCTGGAGGGCGAACGCGACAAGCTG CTTCGGATGGAAGACGAACTGGCGAAATCGGTGATCGGCCAGGGCGATGCGGTGCAGGCCGTGTCGCGCGCCGTCCGCCG CGCGCGTGCCGGCCTGCAGGATCCGAACCGGCCGATCGGTTCGTTCATCTTCCTCGGCCCGACCGGCGTCGGCAAGACGG AACTCACCAAGGCGCTCGCCCGCTTCCTCTTCGACGACGAAACGGCGATGGTGCGCATGGATATGTCGGAATATATGGAG AAGCACTCCGTTGCCCGGCTGATCGGTGCGCCTCCCGGCTATGTCGGTTATGATGAAGGTGGAGCGCTGACGGAGGCGGT GCGCCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAAAAGGCGCATCCCGACGTCTTCAATATCCTGCTGCAGG TGCTGGACGACGGGCGTCTGACGGACGGCCAGGGCCGGACGGTCGATTTCCGCAACACGATGATCATCATGACCTCGAAT CTCGGCGCCGAATATCTGACGCAGCTGAGGGACGGCGACGACAGCGACACGGTTCGCGAGCAGGTGATGGAGGTGGTGCG CGGGCATTTCCGGCCGGAATTCCTGAACCGCATCGACGAGATCATCCTCTTCCATCGCCTGAAGCGCGAGGAGATGGGGG CGATCGTCGATATCCAGCTGAAGCGGCTGGTGGCTCTGCTGTCCGAGCGCAAGATCGTCATCGACCTCGACGAGGAAGCC CGCCACTGGCTGGCGAACAAGGGTTACGATCCGGTCTACGGCGCAAGGCCGCTGAAGCGGGTGATCCAGAAGTTCGTGCA GGATCCGCTGGCCGAGCAAATCCTGTCCGGCCAGGTGCCGGACGGATCGACGGTGACGGTGACGAATGGTTCGGACCGGC TGCAGTTCACGACGAGGCAGACGGTGAGCGAAGCGGCGTAA Protein sequence : MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGDAKAARLANDAALAKLPKISGGNGN IYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALSIESSASTFSTLKNAGVTAQGLNQVINDIRKGRTADSSNAEQGFD SLKKFARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLMA LDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKEKYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAA RLRMQVDSKPEELDELDRRIMQLKIEREALKKETDVASADRLKRLETEVTDLEEQADALTARWQAEKQKLGLAADLKKQL DDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVDAEKQDGDRGAMVQEVVIPDNIAHVVSRWTGIPVDRMLEGERDKL LRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYME KHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMIIMTSN LGAEYLTQLRDGDDSDTVREQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAIVDIQLKRLVALLSERKIVIDLDEEA RHWLANKGYDPVYGARPLKRVIQKFVQDPLAEQILSGQVPDGSTVTVTNGSDRLQFTTRQTVSEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-110 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_769854.1 | chaperone ClpB (heat-shock protein) | VFG2076 | Protein | 2e-119 | 45 |
| clpB | YP_769854.1 | chaperone ClpB (heat-shock protein) | VFG2084 | Protein | 1e-108 | 43 |
