Gene Information

Name : acoD (RL4267)
Accession : YP_769842.1
Strain : Rhizobium leguminosarum 3841
Genome accession: NC_008380
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 4525038 - 4526546 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence :
ATGCTTCATCAGAAAATCGTCGAGTCGCCGTTCAAGCTGAAATACGGCAACTATATCGGCGGCGAATGGCGCGAGCCGGT
CGAGGGGAAATACTTCGAAAACCTCACGCCCGTCACCGGCGGCAAGCTCTGCGACATTCCCCGCTCCAATGAAAAGGACA
TCAATCTCGCGCTCGACGCCGCCCATGCGGCTAAGGAAAAATGGGGCCGCACCTCCGCTGCCGAGCGCTCCAATATCCTC
ATGAAGATTGCCCAGCGCATGGAAGACAAGCTGGAGTTGCTCGCCCAGGCCGAGACCTGGGACAACGGCAAGCCGATCCG
CGAAACCATGGCCGCCGACATTCCGCTGGCGATCGACCATTTCCGTTATTTCGCCTCCTGCATCCGCGCCCAGGAAGGTT
CGATCGGCGAGATCGACCACGACACCGTCGCCTATCACTTCCATGAACCGCTCGGCGTCGTCGGCCAGATCATTCCGTGG
AACTTCCCGATCCTGATGGCGACCTGGAAGCTGGCGCCGGCACTTGCCGCCGGCAACTGCGTCGTGCTGAAGCCCGCCGA
ACAGACACCGGCTTCGATCCTGCTCTGGGCCGAACTCGTCGGCGATCTCCTGCCGCCCGGCGTGCTCAACATCGTCAACG
GCTTCGGCCTTGAAGCCGGCAAGCCGCTGGCAACCAGCCCGCGCGTCGCCAAGATCGCCTTCACCGGCGAGACGACGACA
GGCCGGCTCATCATGCAATATGCCAGCCAGAACCTCATTCCGGTGACGCTGGAGCTCGGCGGCAAATCGCCGAACATCTT
CTTCGCCGATGTGATGGCTGAAGATGACGACTTCCTCGACAAGGCGCTCGAAGGCTTTGCGATGTTTGCCCTCAATCAGG
GCGAAGTCTGCACCTGCCCGAGCCGCGCCCTCGTCCAGGAATCGATCTACGACCGCTTCATGGAAAAGGCCGTCAAACGC
GTTGAGGCGATCAAGCAGGGCAACCCGCTCGACACCGCAACGATGATCGGCGCTCAGGCCTCTAGCGAGCAGTTGGAAAA
AATCCTCGCCTATCTCGATATCGGCAAGCAGGAAGGCGCGGAAGTGCTGACCGGCGGCGCGCGCAACGATCTCGGCGGCG
AGTTGGCGAATGGCTATTATGTCAAGCCGACGATCTTCAAGGGTCACAACAAGATGCGTGTGTTCCAGGAGGAGATCTTC
GGACCGGTGGTTTCGGTCACGACCTTCAAGGACGAGAAGGAGGCGCTCGAAATCGCCAACGACACGCTCTACGGTCTAGG
CGCCGGTGTCTGGAGCCGCGACGCCAATCGCTGCTACCGTTTCGGCCGCGAGATCCAGGCCGGCCGCGTCTGGACCAACT
GCTACCACGCCTACCCGGCCCATGCCGCCTTCGGCGGCTACAAGCAGTCGGGCATCGGTCGTGAAACCCACAAGATGATG
CTCGACCACTACCAGCAGACCAAGAACATGCTGGTGAGCTACAGCCCGAAAGCGCTTGGCTTCTTCTGA

Protein sequence :
MLHQKIVESPFKLKYGNYIGGEWREPVEGKYFENLTPVTGGKLCDIPRSNEKDINLALDAAHAAKEKWGRTSAAERSNIL
MKIAQRMEDKLELLAQAETWDNGKPIRETMAADIPLAIDHFRYFASCIRAQEGSIGEIDHDTVAYHFHEPLGVVGQIIPW
NFPILMATWKLAPALAAGNCVVLKPAEQTPASILLWAELVGDLLPPGVLNIVNGFGLEAGKPLATSPRVAKIAFTGETTT
GRLIMQYASQNLIPVTLELGGKSPNIFFADVMAEDDDFLDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMEKAVKR
VEAIKQGNPLDTATMIGAQASSEQLEKILAYLDIGKQEGAEVLTGGARNDLGGELANGYYVKPTIFKGHNKMRVFQEEIF
GPVVSVTTFKDEKEALEIANDTLYGLGAGVWSRDANRCYRFGREIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM
LDHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-154 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-160 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-160 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-160 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-159 64
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
acoD YP_769842.1 acetaldehyde dehydrogenase VFG0082 Protein 5e-155 64