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Name : lysS (RL4185) Accession : YP_769760.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 4437550 - 4439046 bp Length : 1497 bp Strand : + Note : - DNA sequence : ATGGCTGACAACAAGAGCGAAAACACCCTTTCCTCCGACGCGACGGAAGTGCGCGCTCAGAAGCTGAAGCTGCTGCGTGA GCAGATCGGCGAGGTCTATCCGGCGCATTTCCACCGCACGATGACCAACGCCGAGCTCATCGCGAAATATGAGAACCTGG AACCTGACGTCGAGACGCAGGATGTCGTTACCGTCGCCGGCCGCGTCTACTCGTCGCGCAACTCCGGCATGTTCATGGAC ATCCACGATGCCCGCGGCAAGATCCAGATTTTCAGTCACAAGGACACGACCCCGGAAGAAGCCCGTGCGCTTCTGCCGAT GATCGACATCGGCGACATCATCGGCGTCACCGGCAGCGTACGCCGCACCAAACGCGGCGAGCTGACGATCAATGCGCAGA CGATCACCATGCTGACGAAGTCGCTGCTGCCGATGCCGGAGAAGTGGCACGGTCTCTCCGACATCGAACTGCGTTATCGC AAGCGCCATCTCGACATCATGACCAACGAGGATTCGAAGCTCCGCTTCCAGCAGCGCTCGAAGATCCTCTCCGGCATCCG CCGCTTCATGGAAAATGACGGCTTCATGGAAGTCGAGACGCCGATGCTGCAGTCGGTCTATGGCGGCGCCACCGCCGAGC CGTTCAAGACCCATCACAACACGCTAAAGCTCGACATGTACCTGCGCATCGCGCCGGAACTGTTCCTCAAGCGCACGCTG ATCTCGGGGCTCACCGACAAGGTCTTCGAGGTCAACCGGAACTTCCGCAACGAAGGCGTCTCCACCCGACACAATCCCGA ATTCACCATGATGGAGTGTTACTGGGCCTATGCCGATTACGAGGACATCATGGACCTCGTCGAGCGGCTGTTCGAGAGCT TGGCGCTCTCCATTCACGGCACGACGGAATTCCCCTTCGGCGACAAGACCATGTCCTTCAAGGGTCCGTTCAAGCGCGTT CCGATGCCCGATGCCGTCAAGGAAGCGACCGGCATCGACTTCCGCGCCATCAAGACCGATGAAGAGGCGCGCGTCGCCGC CAAGGCTGCCGGCTTCGCAGTCGAGAAGGATTGGACCTGGGGCGAATGCCTCGCCTTCATCTTCGAGGAAAAAGTCGAAT CCACCCTGATTCAGCCGTCGCATGTCACGCATTTTCCGAAGGACATCTCGCCCTTCGCCAAGGAAGTGCCGGGCGAGCCG CGCCTCGTCGAGCGCTTCGAGACCTATTGCAACGCCTGGGAACTCGGCAACGCCTTCTCGGAACTCAACGATCCCGAAGA GCAGCGCCGCCGCATGGTCGAGCAGCTCGAACAGGCGCATGCCCGCGGCGAAAAGGAAAAGCAGCTGGACGAGGAATTCC TCGACGCGATCGACCAGGGCATGCCGCCGGCAGGTGGCCTCGGCATCGGCGTCGACCGTCTCATCATGCTTCTGACCAAT GCGCCGTCGATTCGCGACGTCATCCTCTTCCCGGCCCGCCGCAGCAAGGCCGACTGA Protein sequence : MADNKSENTLSSDATEVRAQKLKLLREQIGEVYPAHFHRTMTNAELIAKYENLEPDVETQDVVTVAGRVYSSRNSGMFMD IHDARGKIQIFSHKDTTPEEARALLPMIDIGDIIGVTGSVRRTKRGELTINAQTITMLTKSLLPMPEKWHGLSDIELRYR KRHLDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETPMLQSVYGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTL ISGLTDKVFEVNRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFESLALSIHGTTEFPFGDKTMSFKGPFKRV PMPDAVKEATGIDFRAIKTDEEARVAAKAAGFAVEKDWTWGECLAFIFEEKVESTLIQPSHVTHFPKDISPFAKEVPGEP RLVERFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTN APSIRDVILFPARRSKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-100 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_769760.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-100 | 47 |
