|
Name : sitC (RL3886) Accession : YP_769464.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Virulence Product : iron ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 4114001 - 4114861 bp Length : 861 bp Strand : + Note : - DNA sequence : ATGATAGCCGACCTCCTGCAGCCCTTCACCTATGAATACATGCTCAATGCCATGTGGGTGTCCGCCCTTGTCGGCGGCGT CTGCGCTTTCCTCTCCTGTTATCTGATGCTGAAAGGCTGGTCGCTGATCGGCGACGCGCTCTCGCACGCGATCGTTCCCG GCGTCGCCGGCGCCTATATGCTCGGACTTCCCTTTTCGATCGGAGCCTTCTTTTCCGGAGGACTCGCTGCCGCAGCGATG CTTTTCCTCAACCAGCGCACCAAGCTGAAGGAAGATGCCATCATCGGCCTGATCTTCTCCTCTTTCTTCGGGCTGGGCCT GTTCATGGTTTCGCTCCAACCTATGGCGGTCAACATCCAGACGATCGTGCTCGGCAACATTCTCGCCATCACGCCCGAGG ATACGCTGCAACTCGCCATCATCGGCTTCGTGTCGCTCGCCGTCCTGCTCGTCAAATGGAAAGACCTGATGGTCACTTTC TTCGACGAGAGCCATGCCCGATCGATCGGTCTCAATCCGACCGCTCTCAAGGTCATTTTCTTCACGCTGCTGTCCGCCTC CACCGTCGCGGCGCTGCAGACCGTCGGTGCGTTCCTCGTCATCTGCATGGTGGTGACGCCCGGCGCGACCGCCTATCTGC TGACCGACCGCTTTCCGCGGCTGCTTGTGATCGCGGTCATCATCGGATCGATGACCAGCTTCGTTGGCGCTTATGCGAGT TACTTCCTTGATGGCGCGACAGGCGGCATCATCGTCGTGCTGCAGACGGCAATCTTCCTGGTCGCGTTCTTCTTCGCACC CAAACACGGCATGCTGGCGGCACGCAGACGTGCTGCGCAGGCGCTGGAGGCAGCGCCATGA Protein sequence : MIADLLQPFTYEYMLNAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHAIVPGVAGAYMLGLPFSIGAFFSGGLAAAAM LFLNQRTKLKEDAIIGLIFSSFFGLGLFMVSLQPMAVNIQTIVLGNILAITPEDTLQLAIIGFVSLAVLLVKWKDLMVTF FDESHARSIGLNPTALKVIFFTLLSASTVAALQTVGAFLVICMVVTPGATAYLLTDRFPRLLVIAVIIGSMTSFVGAYAS YFLDGATGGIIVVLQTAIFLVAFFFAPKHGMLAARRRAAQALEAAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-85 | 82 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-85 | 82 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-85 | 82 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-85 | 82 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-85 | 82 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 8e-37 | 41 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 5e-37 | 41 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 4e-37 | 41 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 9e-37 | 41 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 8e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitC | YP_769464.1 | iron ABC transporter | BAC0351 | Protein | 1e-85 | 82 |
| sitC | YP_769464.1 | iron ABC transporter | BAC0441 | Protein | 7e-70 | 69 |
| sitC | YP_769464.1 | iron ABC transporter | BAC0442 | Protein | 2e-32 | 42 |
| sitC | YP_769464.1 | iron ABC transporter | BAC0352 | Protein | 2e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitC | YP_769464.1 | iron ABC transporter | VFG0527 | Protein | 1e-85 | 82 |
| sitC | YP_769464.1 | iron ABC transporter | VFG0528 | Protein | 2e-37 | 41 |
