|
Name : serS (RL2049) Accession : YP_767647.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2161677 - 2162960 bp Length : 1284 bp Strand : + Note : - DNA sequence : ATGCTCGATATCAAATGGATCCGTGAGAATCCCGAAGCGCTCGATGCCGCCCTAGCCAAGCGCGGCGCGGAGCCTCTGGC CCAAAGTCTCGTTGCCCTCGATGAAAAGCGCCGCTCCGCTGTGCAGAAGGCGCAGGACCTGCTGTCCCGCCGCAACCTCG CCTCCAAGGAGATTGGCGCGGCGATGGCCCAGAAGAATAGCGAGCTGGCCGAGAAGCTGAAGGCGGAGGTCTCCGAACTT AAGACCCTGCTGCCGGCGATCGAGGAAGAGGATCGCCAACTGACAGCCGAACTCAATGACGCGCTGTCGCGCATCCCGAA CATCCCCTTCGACGACGTCCCGGTCGGCAAGGACGAGCATGACAATATCGTCACCCGCACCGTCGGCGAAAAGCCGCGCT GGAACCACGCACCGAAGGAGCACTTCGAAATCGGCGAGGCGCTCGGCTATATGGATTTCGAGCGCGCCGCCAAGCTCTCC GGCTCGCGCTTCACGGTTCTGACCGGGCCGCTCGCCAGGCTCGAGCGTGCGCTCGGCCAGTTCATGATCGATCTCCACAC CAGTGAGCACGGCTATATCGAAGTCAGCTCGCCGCTGATGGTGCGCGACGAGGCCGTCTATGGCACCGCCCAGCTGCCGA AATTCGCCGAGGATCTCTTCAGGACGACGGATGGACGCTGGTTGATTCCGACGGCCGAAGTGACGCTGACCAATCTGGTG CGCGAGGAAATCCTCGATCAGGAAAAGCTGCCGCTCCGCTTTACCGCGCTGACGCCGTCCTTCCGCTCGGAAGCAGGCTC TGCCGGCCGCGATACGCGCGGCATGCTGCGCCAGCATCAGTTCTGGAAATGCGAGCTCGTCTCGATCACCGATGCCGAGA GCGCCGTTGCCGAGCATGAGCGCATGACCGCCTGCGCCGAGGAAGTGCTGAAGCGCCTCGGCCTGCATTTCCGCACGATG ACGCTTTGCACCGGCGACATGGGCTTCGGCTCGCGCAAGACCTACGATCTCGAAGTCTGGCTGCCGGGGCAGAATGCCTT CCGTGAAATCTCTTCCTGCTCGGTCTGCGGCGATTTTCAGGGTCGGCGGATGAATGCGCGCTACCGCGGCAAGGACGACA AGAGCAACAAGTTCGTCCACACGCTGAACGGTTCCGGCACGGCGGTCGGCCGCTGCCTGATCGCCGTCCTTGAAAATTAT CTGAACGAGGACGGTTCGGTCACGATTCCGGACGTTTTGCTGCCCTATATGGGCGGATTGACCAAAATCGAACGGGCGGC TTGA Protein sequence : MLDIKWIRENPEALDAALAKRGAEPLAQSLVALDEKRRSAVQKAQDLLSRRNLASKEIGAAMAQKNSELAEKLKAEVSEL KTLLPAIEEEDRQLTAELNDALSRIPNIPFDDVPVGKDEHDNIVTRTVGEKPRWNHAPKEHFEIGEALGYMDFERAAKLS GSRFTVLTGPLARLERALGQFMIDLHTSEHGYIEVSSPLMVRDEAVYGTAQLPKFAEDLFRTTDGRWLIPTAEVTLTNLV REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHERMTACAEEVLKRLGLHFRTM TLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQGRRMNARYRGKDDKSNKFVHTLNGSGTAVGRCLIAVLENY LNEDGSVTIPDVLLPYMGGLTKIERAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-91 | 50 |
