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Name : RL0188 (RL0188) Accession : YP_765793.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 224192 - 225829 bp Length : 1638 bp Strand : + Note : - DNA sequence : ATGAGTGACATGACAGAACCGTTGCTTTCCGTCCGCGATCTCTCGGTTGCCTTTCATCAGGGCGGCGAAACCTCGCTCGC GGTCGATCATATCTCCTTCGATATCGCCAAAGGCGAAGTCGTGGCGCTCGTCGGCGAATCCGGCTCCGGCAAGTCGGTCT CGGCCAATTCGATCCTGCGGCTTTTGCCTTATCCTTCCGCAAGCCATCCCTCGGGTGAAATCCTGTTCAAGGGCAAGGAC CTTCTGAAGGCGTCGGAGCGGGCGCTGCGGGAAGTGCGTGGCAACGACATCACCATGATCTTCCAGGAGCCGATGACCTC GCTCAATCCGCTTCATACGATCGAGAAGCAGATCGCCGAGATCCTCGCCCTGCACCAGGGCCTCACCGGTCAGTCGGCAC GCCAGCGCGTGCTGGAATTGCTGAACCAGGTCGGCATCCGCGAGCCGGAGAAGCGGTTGAAAGCCTATCCGCACGAACTG TCAGGTGGCCAGCGCCAGCGCGTCATGATCGCCATGGCGCTCGCCAACCGGCCGGAATTGCTGATCGCCGACGAGCCGAC CACCGCCCTCGACGTCACTGTACAGGCGCAGATCCTCGAATTGCTCCGGCAGTTAAAAGCCGTCCACGGCATGTCGATGC TGTTCATCACTCATGATCTCGGCATCGTCCGCAAATTCGCCGATCGCGTCTGCGTCATGACCAAGGGCAAGATCGTCGAA ACCGGCACCGTCGAGGAGGTCTTCGCCAATCCGAAGCATGACTATACCCGGCATCTTCTCGCCTCCGAACCACGTGGCGA GCCGCCGCTGGCCGATCCGTCGAAACCATTGGTGATGGAAGGTTCGGACATCCGCGTCTGGTTCCCGATCAAATCAGGGC TGATGCGCCGCGTCGTCGATCACGTCAAGGCAGTCGATGGCATCGATCTTTCGCTGCGCGCCGGCCAGACGCTCGGCGTC GTCGGCGAGTCTGGCTCGGGTAAGACCACGCTCGGCCTGGCGCTCACCCGGCTGATTTCCTCGGAAGGGCGGATCGCCTT CGTCGGCAAGGATATAGCCGGCTATTCGTTCAACGAGATGCGGCCGCTGCGCAACCAGCTGCAGGTGGTCTTCCAGGATC CCTATGGATCGCTGAGCCCCCGCATGTCGGTCGGCGATATCGTCGCCGAAGGGTTGAAGGTGCATGAGCGGTCCCTGACA TCAGAAGAACGCGACCAGCGCGTCTGCTGGGCGCTGGAGGAGGTGGGTCTCGATCCGCTGACCCGCTGGCGTTATCCGCA CGAATTCTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGGGCCATGGTGCTGAAGCCGCGCTTCGTCATGCTCGACG AGCCGACCTCCGCGCTCGACATGAGCGTGCAGGCGCAGGTGGTCGATCTCCTGCGTGATCTGCAGAAGAAGCACGACCTC GCCTATCTCTTCATCAGCCACGACCTGAAGGTGGTGAAGGCGCTCGCCAACGACGTCATCGTCATGCGTTTCGGCAAGGT GGTGGAACAGGGTCCGTCAGCCGACATCTTCCGCGCGCCGAAGGACGATTACACCCGGGCACTGATGGCCGCCGCTTTCA ACATCGAGGCGGTGCCGACACCCGCCGTACAGCAATAA Protein sequence : MSDMTEPLLSVRDLSVAFHQGGETSLAVDHISFDIAKGEVVALVGESGSGKSVSANSILRLLPYPSASHPSGEILFKGKD LLKASERALREVRGNDITMIFQEPMTSLNPLHTIEKQIAEILALHQGLTGQSARQRVLELLNQVGIREPEKRLKAYPHEL SGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLRQLKAVHGMSMLFITHDLGIVRKFADRVCVMTKGKIVE TGTVEEVFANPKHDYTRHLLASEPRGEPPLADPSKPLVMEGSDIRVWFPIKSGLMRRVVDHVKAVDGIDLSLRAGQTLGV VGESGSGKTTLGLALTRLISSEGRIAFVGKDIAGYSFNEMRPLRNQLQVVFQDPYGSLSPRMSVGDIVAEGLKVHERSLT SEERDQRVCWALEEVGLDPLTRWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQKKHDL AYLFISHDLKVVKALANDVIVMRFGKVVEQGPSADIFRAPKDDYTRALMAAAFNIEAVPTPAVQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 9e-100 | 43 |
