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Name : RL1670 (RL1670) Accession : YP_767274.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Resistance Product : transmembrane efflux protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 1749654 - 1750841 bp Length : 1188 bp Strand : - Note : - DNA sequence : ATGTCCTATCCCAAAATCCAGCAATGGACCTATTCCCTGCCCGCAGCCTTGCTGCTGATGGCACCGTTCGACATCCTGGC CTCGCTCGCCATGGATATCTATCTGCCGATCGTGCCGGTCATGCCGGAGGCGCTCGGCACTTCGCCGGCCGTCATCCAGC TGACCCTCAGCCTCTACATGCTCGTGCTCGGTGTCGGCCAGATCGTCTTCGGCCCAATTTCCGATATTGTCGGACGACGG CCTGTCCTGCTTGGAGGTGCTGCACTCTTTGCCGCTTCATCCTTCCTGCTTGTCGGCTCCTCGTCGGCGCCGATCTTCGT GGTCTTGAGATTGCTGCAGGCAGTCGGCGCGTCGGCGACCCTCGTCGCAACTTTCGCAACCGTGCGTGACGTCTACGCCG GGCGCCCCGAAAGCAGCACGATCTATAGCCTTCTCGGCTCCATCCTCTCCTTCGTGCCGGCACTCGGCCCGATCATCGGA GCCTTGATCGCGGATCGCTTCGGCTGGCGCGCCATCTTCCTCGTCATCGGCTTCCTTTCGGTTGTCGCCCTTTTCAACGC CGGCATGCGATGGCACGAAACCCGCCCTGCCGTCACCGCGAAGATCGCTCTCCGCCCGATCCTTACAAGCCTTCCCTTCT GGGTTTATACGGGCGGCTTCAGCACGGCGATGGGCGCCTTCTTCGTCTTCTTCTCGACGGCACCCCGTATCCTGATCGAC AAAGCCGGTTTTTCCGGCATCGCCTTCAGCTTCATCTTTGCCACGGTGGCGCTGGTGATGATCGTGACGGCGCGTTTCGC CAAGCGTTTCGTCATGCGCTGGGGCATTGCAGGTAGCCTTGCCAGAGGCATGTCAATGCTGCTTCTCGGCGCCGTTCTGC TTGCTTTTGGAGAGTTGTTTCTGCAGCCTTCCCTGGTCAGCTTCGTCGTGCCGATGTGGATTATTGCGATAGGCATCGTC GTTGCGACGGCGGTCACCGCCAACGGCGCGCTCGACGCCTTTGGCGACACGGCAGGAACGGCGGTCGCGCTCTATTTCTG CGTCCAGAGCATCATCGTCGGCTTTGTCGGAACCTCCTTCGTGATTCTGCTCGGCGGCGACAGTGCCAGGCCGCTTGTGG GCTATGTCTCAGCGACCGCGCTGACGACGTTGGCTGGATTGTGGTGCCTGCGGGAGCCGGCCCGATAG Protein sequence : MSYPKIQQWTYSLPAALLLMAPFDILASLAMDIYLPIVPVMPEALGTSPAVIQLTLSLYMLVLGVGQIVFGPISDIVGRR PVLLGGAALFAASSFLLVGSSSAPIFVVLRLLQAVGASATLVATFATVRDVYAGRPESSTIYSLLGSILSFVPALGPIIG ALIADRFGWRAIFLVIGFLSVVALFNAGMRWHETRPAVTAKIALRPILTSLPFWVYTGGFSTAMGAFFVFFSTAPRILID KAGFSGIAFSFIFATVALVMIVTARFAKRFVMRWGIAGSLARGMSMLLLGAVLLAFGELFLQPSLVSFVVPMWIIAIGIV VATAVTANGALDAFGDTAGTAVALYFCVQSIIVGFVGTSFVILLGGDSARPLVGYVSATALTTLAGLWCLREPAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 1e-97 | 65 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 3e-98 | 64 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 3e-98 | 64 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 3e-98 | 64 |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 5e-95 | 63 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 5e-95 | 63 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 2e-72 | 50 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 3e-72 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RL1670 | YP_767274.1 | transmembrane efflux protein | DQ522237.1.gene4.p01 | Protein | 1e-72 | 50 |
| RL1670 | YP_767274.1 | transmembrane efflux protein | NC_010410.6003586.p0 | Protein | 1e-72 | 50 |
| RL1670 | YP_767274.1 | transmembrane efflux protein | AF294653.1.gene4.p01 | Protein | 2e-72 | 50 |
| RL1670 | YP_767274.1 | transmembrane efflux protein | DQ984668.gene.p01 | Protein | 1e-72 | 50 |
| RL1670 | YP_767274.1 | transmembrane efflux protein | AF156486.gene.p01 | Protein | 2e-71 | 49 |
