Gene Information

Name : RL1441 (RL1441)
Accession : YP_767045.1
Strain : Rhizobium leguminosarum 3841
Genome accession: NC_008380
Putative virulence/resistance : Virulence
Product : two-component response regulator transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1498396 - 1499142 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGCCGCCCCGCAGGAAGATGCTTTGAGCCTTGCCGAAACGCAGCCGGCGGGTAATGTCGGCCGCATGAAGATTCT
CATCATCGAAGATGATCTCGAAGCAGCCGTCTACCTCACGAAAGCCTTTCGCGAGGCGGGCATCGTCGCCGATCACGCCA
GCGACGGCGAGAGCGGCCTGTTCATGGGGTCGGAAAATACCTACGACGTCATCGTCATCGACCGCATGCTGCCGCGCCGC
GACGGGCTCTCGGTCATCAGCGAGTTGCGCCGCAAGGCTATCCATACGCCGGTCCTCATCCTCTCGGCACTCGGCCAGGT
CGATGACCGCGTGACCGGTCTTCGTGCCGGCGGCGATGACTACCTGCCGAAGCCCTATGCCTTCAGCGAGTTGCTGGCGC
GCGTCGAGGTGCTTGGCCGCCGCAAGGGCACGCCGGACCAGGACGTCGTCTATCGCGTCGGCGATCTCGAACTCGACCGG
CTCTCCCACGAGGTGCGCCGCGGCGGCAAGGAGATCCCGCTGCAGCCGCGCGAATTCCGCCTGCTGGAATATCTGATGAA
GAATGCCGGCCAGGTGGTGACCCGCACCATGCTGCTCGAAAACGTCTGGGACTATCACTTCGACCCGCAGACCAACGTCA
TCGACGTCCATGTCTCGCGGCTGCGCTCGAAGATCGAAAAGGACTACAGCCAACCGCTCCTGAAGACCATTCGCGGCGCG
GGGTACATGATCAAGGATGAGGGATGA

Protein sequence : 
MSAAPQEDALSLAETQPAGNVGRMKILIIEDDLEAAVYLTKAFREAGIVADHASDGESGLFMGSENTYDVIVIDRMLPRR
DGLSVISELRRKAIHTPVLILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARVEVLGRRKGTPDQDVVYRVGDLELDR
LSHEVRRGGKEIPLQPREFRLLEYLMKNAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKIEKDYSQPLLKTIRGA
GYMIKDEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0125 Protein 3e-46 46
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0347 Protein 3e-46 46
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0111 Protein 1e-48 45
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0197 Protein 2e-43 45
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0083 Protein 2e-45 44
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0308 Protein 2e-41 44
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein BAC0638 Protein 5e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein VFG1389 Protein 8e-34 42
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein VFG0596 Protein 4e-39 41
RL1441 YP_767045.1 two-component response regulator transcriptional regulatory protein VFG1390 Protein 3e-37 41