Gene Information

Name : RL1157 (RL1157)
Accession : YP_766764.1
Strain : Rhizobium leguminosarum 3841
Genome accession: NC_008380
Putative virulence/resistance : Virulence
Product : two-component response regulator transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1234567 - 1235256 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGGGCTGATGCGAATCCTGCTTATCGAGGACGATACCAAGACGTCCGATTATATCGCCAAGGGCTTTTCCGAGGC
CGGGCATGTCTGTGATGTGGTCGGCGACGGCCGGGACGGGCTGTTTCAGGCGCAGCGCGAGGCCTATGACGTCATCGTCG
TCGATCGCATGCTGCCGGGTCTCGATGGACTGGCGATCGTGCGTTCGCTTAGGGCTGCCAAGGTCGGCACGTCGGCGCTG
TTCCTGACGTCGATCGGCGGCGTCGACGATCGGGTCGAGGGGCTGGAGGCGGGCGGCGACGATTATCTGGTCAAGCCCTT
TGCCTTCTCCGAGCTGATGGCGCGCGTCAATGCGCTTGGCCGGCGGCCGCCGGTGCAGGAGCAGCGGACGGTGCTGAAGG
TTGCCGATCTCGAGCTCGATCTGATCCGGCGGGAGGCCCGCCGCGCCGGCCAGGTGATCGAGCTGCAGCCGCGCGAATTC
ACCCTGCTCGAGGTGCTGATGCGCGGCGAAGGCCGGGTCATCACCAAGACGATGCTGCTGGAGCGGGTCTGGGATTTCCA
CTTCGATCCGAAGACCAGCGTCGTCGAGACCCATATCAGCCGGCTGAGAGCCAAGGTCGACAAGCCGTTCCAGATCCAGC
TTCTGCATACGGTCCGCAACACCGGATACAGCCTGCATGCGCCTCGCTAG

Protein sequence : 
MIGLMRILLIEDDTKTSDYIAKGFSEAGHVCDVVGDGRDGLFQAQREAYDVIVVDRMLPGLDGLAIVRSLRAAKVGTSAL
FLTSIGGVDDRVEGLEAGGDDYLVKPFAFSELMARVNALGRRPPVQEQRTVLKVADLELDLIRREARRAGQVIELQPREF
TLLEVLMRGEGRVITKTMLLERVWDFHFDPKTSVVETHISRLRAKVDKPFQIQLLHTVRNTGYSLHAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-43 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-44 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0083 Protein 6e-53 51
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0197 Protein 1e-51 51
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0125 Protein 9e-50 47
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0638 Protein 3e-45 47
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0347 Protein 7e-46 45
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0111 Protein 8e-51 45
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein BAC0308 Protein 8e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein VFG0596 Protein 1e-43 46
RL1157 YP_766764.1 two-component response regulator transcriptional regulatory protein VFG1389 Protein 6e-31 43