|
Name : gabD (RL0101) Accession : YP_765705.1 Strain : Rhizobium leguminosarum 3841 Genome accession: NC_008380 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 128390 - 129871 bp Length : 1482 bp Strand : - Note : - DNA sequence : ATGGCTTTCACCAGCGCACTGACCAAGCACGTTCCCTTCTCCTCGCCCCTGCTGCGCGATGCCGGCTATATCGACGGCGT CTGGACATCAGGCGATGCCACAAAGACTTTCGACGTGCTGAACCCGGCAACCGGCGAGCTGCTCGCCTCGCTGCCCGATA TGGGTGCGGCCGAGACGCGGGCGGCAATCGATGCGGCCCATGCCGCCCAGCCGGGCTGGGCTGCCCGTCCGGCCAGGGAG CGCAGCACGATCCTGCGCAAATGGTTCGACCTGATGGTCGCCAATGCCGACGAACTCGCGGCGATCCTGACCGCCGAAAT GGGCAAGCCGTTCCCGGAAGCGCGCGGCGAGATCCTTTATGCCGCGGCCTATATCGAATGGTACGCGGAAGAAGCCAAGC GCATCTACGGCGAGACGATCCCCGCGCCTTCCGACGATAAACGGATGATCGTCATCAGGCAGCCGGTCGGCGTCGTCGGC ACGATCACGCCGTGGAATTTCCCGGCGGCGATGATCACTCGCAAGATCGCCCCGGCGCTTGCCGTCGGCTGCACCGTGGT CTCGAAGCCCGCCGAACAGACGCCGCTGACGGCGATCGCGCTTGCCGTGCTCGCCGAGCAGGCCGGCATTCCGGCCGGCG TCTTCAACGTTATCGTCGGGGTCGACGGTCCGGCGATCGGCCGCGAGCTCTGCGGCAACGAAAAGGTGCGCAAGATCAGC TTCACCGGTTCGACGGAAGTCGGCCGCATCCTGATGCGGCAGTGCGCCGACCAGATCAAGAAGGTAAGCCTGGAGCTCGG CGGCAACGCACCCTTCATCGTCTTCGACGATGCCGATCTCGACGCCGCCGTCGAAGGCGCGATCGCCTCCAAATACCGCA ATGCCGGCCAGACCTGCGTTTGCGCCAACCGCCTCTACGTCCAGTCGAACGTCTATGACGCCTTCGCCGCCAAGCTTGCC GCGAAGGTCGCCGAGATGTCGGTAGGCGACGGCTTCGAGCCGGGTGTCGTGATCGGGCCGCTGATCGACGAGCAAGGCCT TGCAAAGGTGGAGGACCATGTCAGCGACGCGCTTGCCAAGGGCGCCAAGCTGCTGACCGGCGGCAAGCGCATCGACGGCG CCGGCACCTTCTTCACGCCGACGGTACTGACCGGCGTGGCGCGCGGCATGAAGGTGGCGCGCGAGGAGACCTTCGGGCCG GTGGCGCCGCTCTTTCGCTTCGACACGGTCGAGGATGTCATCAACCAGGCCAATGATACGGAATTCGGTCTTGCCGCCTA TTTCTACGCCGGTGATCTGAAAAAGGTCTGGCGGGTGGCGGAAGCGCTGGAATACGGCATGATCGGCATCAATACCGGCC TGATGTCATCCGAGACGGCACCCTTCGGCGGCATCAAGCAATCCGGCCTTGGCCGCGAAGGCTCGCGGCACGGCGCCGAC GACTATCTGGAAATGAAATATCTCTGCATCGGCGGCGTTTGA Protein sequence : MAFTSALTKHVPFSSPLLRDAGYIDGVWTSGDATKTFDVLNPATGELLASLPDMGAAETRAAIDAAHAAQPGWAARPARE RSTILRKWFDLMVANADELAAILTAEMGKPFPEARGEILYAAAYIEWYAEEAKRIYGETIPAPSDDKRMIVIRQPVGVVG TITPWNFPAAMITRKIAPALAVGCTVVSKPAEQTPLTAIALAVLAEQAGIPAGVFNVIVGVDGPAIGRELCGNEKVRKIS FTGSTEVGRILMRQCADQIKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNAGQTCVCANRLYVQSNVYDAFAAKLA AKVAEMSVGDGFEPGVVIGPLIDEQGLAKVEDHVSDALAKGAKLLTGGKRIDGAGTFFTPTVLTGVARGMKVAREETFGP VAPLFRFDTVEDVINQANDTEFGLAAYFYAGDLKKVWRVAEALEYGMIGINTGLMSSETAPFGGIKQSGLGREGSRHGAD DYLEMKYLCIGGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-133 | 60 |
