Name : pRL90090 (pRL90090) Accession : YP_765382.1 Strain : Genome accession: NC_008379 Putative virulence/resistance : Unknown Product : putative ATP-binding component of ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 90959 - 91759 bp Length : 801 bp Strand : + Note : similarity:fasta; SWALL:Q982M8 (EMBL:AP003014); Rhizobium loti; ABC transporter, ATP-binding protein; mll8572; length 257 aa; 256 aa overlap; query 8-263 aa; subject 2-257 aa DNA sequence : GTGAGAGCGGATTTGCCTGAAGCAGCGGCCATCGAAACCAAGGATCTGGCTGTCGGTTATGCCGGCGCTGTCGAGACGAC CCGCATTCTGTCCGGCGTCGATCTCAGCGTCGGCAGGGGCGAGTTTCTGACCATTCTCGGTCCTTCCGGCTGCGGCAAGT CGACCTTGCTGCGCGCTGTTGCGGATCTTCTCCCGCCGCTTGAAGGACGGTTAGCGGTGCTCGGCAGGACAGCGTCGGAG GCGCGCCGGCGGCGCGAGGTCGCCTTCGTCTTCCAGGACGCGACGCTGCTGCCGTGGCGGACTGTGAGGGAGAATGTCGC GCTGCCGCTGCAGGTGGGGAAGAACAGCGTGTCGCGATCGGTCGATCCGCGGCCCGACCACTGGATCGAACTGGTCGGCC TGTCGCATCTGGCCGATCGCTATCCGCATCAATTGTCCGGGGGCCAGCGCCAACGCGTCGCCATAGCGCGCGCGCTTCAA TGCGAGCCGGATATCCTGCTCATGGACGAGCCCTTCGGTGCGCTAGACGAGATCACCCGCGAACGACTGAACGACGAGCT TCTGGACGTCTGGCGCCGAACCGGCACGACCATCCTGTTCGTCACCCACAGCGTCGTCGAGGCGATCTATCTCGGCGGAC GCGTGCTGGTCCTGGCGGCCAATCCGGGCCGCGTTCAGGCGCTGATCGACCTTGCACCGCTGAAAGACGAGCGTGGGCTC TGTCGGCGCGAGAGCCTCGATGTCCAGGAGACAGCTGCCCATCTGCGCCAATTGCTGCAGCAGGGGAGTTCGGCTGCATG A Protein sequence : MRADLPEAAAIETKDLAVGYAGAVETTRILSGVDLSVGRGEFLTILGPSGCGKSTLLRAVADLLPPLEGRLAVLGRTASE ARRRREVAFVFQDATLLPWRTVRENVALPLQVGKNSVSRSVDPRPDHWIELVGLSHLADRYPHQLSGGQRQRVAIARALQ CEPDILLMDEPFGALDEITRERLNDELLDVWRRTGTTILFVTHSVVEAIYLGGRVLVLAANPGRVQALIDLAPLKDERGL CRRESLDVQETAAHLRQLLQQGSSAA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 2e-37 | 47 |
opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-34 | 42 |
opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 6e-33 | 41 |