Gene Information

Name : pRL90090 (pRL90090)
Accession : YP_765382.1
Strain :
Genome accession: NC_008379
Putative virulence/resistance : Unknown
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 90959 - 91759 bp
Length : 801 bp
Strand : +
Note : similarity:fasta; SWALL:Q982M8 (EMBL:AP003014); Rhizobium loti; ABC transporter, ATP-binding protein; mll8572; length 257 aa; 256 aa overlap; query 8-263 aa; subject 2-257 aa

DNA sequence :
GTGAGAGCGGATTTGCCTGAAGCAGCGGCCATCGAAACCAAGGATCTGGCTGTCGGTTATGCCGGCGCTGTCGAGACGAC
CCGCATTCTGTCCGGCGTCGATCTCAGCGTCGGCAGGGGCGAGTTTCTGACCATTCTCGGTCCTTCCGGCTGCGGCAAGT
CGACCTTGCTGCGCGCTGTTGCGGATCTTCTCCCGCCGCTTGAAGGACGGTTAGCGGTGCTCGGCAGGACAGCGTCGGAG
GCGCGCCGGCGGCGCGAGGTCGCCTTCGTCTTCCAGGACGCGACGCTGCTGCCGTGGCGGACTGTGAGGGAGAATGTCGC
GCTGCCGCTGCAGGTGGGGAAGAACAGCGTGTCGCGATCGGTCGATCCGCGGCCCGACCACTGGATCGAACTGGTCGGCC
TGTCGCATCTGGCCGATCGCTATCCGCATCAATTGTCCGGGGGCCAGCGCCAACGCGTCGCCATAGCGCGCGCGCTTCAA
TGCGAGCCGGATATCCTGCTCATGGACGAGCCCTTCGGTGCGCTAGACGAGATCACCCGCGAACGACTGAACGACGAGCT
TCTGGACGTCTGGCGCCGAACCGGCACGACCATCCTGTTCGTCACCCACAGCGTCGTCGAGGCGATCTATCTCGGCGGAC
GCGTGCTGGTCCTGGCGGCCAATCCGGGCCGCGTTCAGGCGCTGATCGACCTTGCACCGCTGAAAGACGAGCGTGGGCTC
TGTCGGCGCGAGAGCCTCGATGTCCAGGAGACAGCTGCCCATCTGCGCCAATTGCTGCAGCAGGGGAGTTCGGCTGCATG
A

Protein sequence :
MRADLPEAAAIETKDLAVGYAGAVETTRILSGVDLSVGRGEFLTILGPSGCGKSTLLRAVADLLPPLEGRLAVLGRTASE
ARRRREVAFVFQDATLLPWRTVRENVALPLQVGKNSVSRSVDPRPDHWIELVGLSHLADRYPHQLSGGQRQRVAIARALQ
CEPDILLMDEPFGALDEITRERLNDELLDVWRRTGTTILFVTHSVVEAIYLGGRVLVLAANPGRVQALIDLAPLKDERGL
CRRESLDVQETAAHLRQLLQQGSSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-37 47
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-34 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-33 41