Gene Information

Name : pRL90221 (pRL90221)
Accession : YP_765508.1
Strain :
Genome accession: NC_008379
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 239638 - 240411 bp
Length : 774 bp
Strand : -
Note : similarity:fasta; SWALL:Q8UBE9 (EMBL:AE009237); Agrobacterium tumefaciens str. C58; hypothetical protein atu3067; orderedlocusnames=atu3067; length 256 aa; 255 aa overlap; query 1-255 aa; subject 1-255 aa

DNA sequence : 
ATGACCAAAAAAATCCTCCTTGTCGGCGAGAGCTGGGTCAGCTCGGCTACGCATTACAAAGGCTTCGACCAGTTCGGCAG
CGTCACCTTCCATCTCGGCGCCGAACCGCTGGTCAAGGCGCTCGCCGGCAGCGCCTTCGAACTCACCTATATGCCGGCGC
ACGAGGCAGTGGAGAAATTCCCCTTCGATATGACAGGGCTCGACGCCTATGACGCCATCATTCTCTCCGATATCGGCGCC
AACTCGCTGCTGCTGCCCCCAGATGTGTGGCTGCATTCGCGCACCGTGCCGAACCGGCTGAAGCTCCTGAAGGCCTGGGT
GGAAAAGGGCGGCGGCCTGCTGATGGTCGGCGGCTACTTCTCCTTCCAGGGCATCGACGGCAAGGCTCGCTGGCGGCGCA
CCCCCGTCGAAGACACGCTGCCCGTCACCTGCCTGCCTTATGACGACCGCGTCGAAATTCCCGAGGGCACCGTTGCTGAG
GTCGTGAAGCCGGAGCATCCGACGATGCAGGGTCTCGAAGGCGCCTGGCCGGTGCTTCTCGGCGTCAACGAGGTCGAAGT
GCGAGACCGTGCCGATGTCGAGATCGTCGCGCGCCTGCCGGAGGATCAGGGCGGCCTTCCGCTGCTCGTCGTCGGCACGC
ACGGCACTGGGCGGACGGCAGCTTGGACGTCGGATATCGGCCCGCACTGGCTCTCGCCCGCTTTCTGCGAATGGGAAGGC
TACGGCCGGCTCTGGAAGAACATCCTCGGCTGGCTCACCGAAAAGCAGGCGTGA

Protein sequence : 
MTKKILLVGESWVSSATHYKGFDQFGSVTFHLGAEPLVKALAGSAFELTYMPAHEAVEKFPFDMTGLDAYDAIILSDIGA
NSLLLPPDVWLHSRTVPNRLKLLKAWVEKGGGLLMVGGYFSFQGIDGKARWRRTPVEDTLPVTCLPYDDRVEIPEGTVAE
VVKPEHPTMQGLEGAWPVLLGVNEVEVRDRADVEIVARLPEDQGGLPLLVVGTHGTGRTAAWTSDIGPHWLSPAFCEWEG
YGRLWKNILGWLTEKQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-44 44
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 2e-43 42
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 2e-43 42
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 1e-43 42
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 4e-43 42
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 4e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRL90221 YP_765508.1 hypothetical protein VFG0482 Protein 7e-44 42