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Name : pRL120783 (pRL120783) Accession : YP_765286.1 Strain : Genome accession: NC_008378 Putative virulence/resistance : Unknown Product : ABC transporter substrate-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 854687 - 856408 bp Length : 1722 bp Strand : + Note : Similar, but truncated at the N-terminus, to Agrobacterium tumefaciens agr_l_1323p SWALL:Q7CUA2 (EMBL:AE008264) (591 aa); similarity:fasta; SWALL:Q7CUA2 (EMBL:AE008264); Agrobacterium tumefaciens; agr_l_1323p; length 591 aa; id=81.96; ungapped id=82.1; E( DNA sequence : ATGACCGATATTCTTCCCATTGCCGGCAGGCCGCTGCTTCAAGTGAAAAATCTGACGGTCGAGTTCCCGCTGCGCACCGG CGTCTTTCGCGCCGTCAGCGATCTGTCTTTCTCGATCGAGCCGGGCAAGACGCTCTGTGTCGTCGGCGAAAGCGGATCCG GCAAGTCGGTGACGGCGCGTTCGATCCTGCAGATCGTCGATGCACCCGGCCGCATATCCGGCGGATCGATCATGCTGAAC GATCAGAACGGCGGCTCGATCGATCTGACCAGCCTCAATCCGCGCGGGCGTCAGATCCGAGCGATCCGCGGCCGCGACAT CGCCATGATCTTCCAGGAGCCGATGTCGTCGCTATCGCCGATCCACACGGTCGGCAACCAGATCGTCGAGGCGCTTCGCC TTCACACCCGGATGAGCAAGGCAGAGGCGCGCGCTGAAGCCATATCACTGCTCAGCCAGGTCGAGATTCCCTCGCCGGAA AAAGCGCTGGACCGATATGCCTTTCAATATTCCGGCGGGATGCGCCAGCGCGCGATGATTGCCATGGCGCTCGCCTGCAA ACCGCAGCTGCTGATCGCCGACGAGCCGACCACGGCCCTCGACGTGACGACGCAGGCCGAAATTCTCGACCTGATTGCCC GGCTGCAGAAGGCCAAGGGCATGGCCGTTCTCTTCATCACGCATGACATGGGTGTCGTTGCGCAGATCGCCGACGATGTG CTGGTCATGCACAACGGCGTCGCCAAGGAATATGCGCCGGTCGAGCAGATCTTTCATGCGCCGAAAGACGACTATACCCG CATGCTGATTGGCTCGGTGCTGAAGCTGGAAGCGAAGGCCGAAATCCGGCTGGCGCGCCCGCCGCTCGACACGACGGCGC CACCGATCCTCGAACTGCGCAATGTCTCGATGGATTTCGGCGAGGTGAAAGCGCTGGACGATGTTTCCATTTCGCTTCTG CCGGGCGAAACGCTCGGCATCGTCGGCGAGAGCGGATCCGGCAAGACGACGATGGGTCGCTCGATCATGCGGTTGATCGA TCCGACTGCAGGCGAAATCCTCTATCGCCGCGCCGACGGCGACATCATCGATCTGGCAACGGCAAAAGGGCAGACGCTTG CCGCCGCACGGCGGGAATTACGGATGGTGTTTCAGGATCCTTTCGGCTCCCTCAACCCACGCATGACCGTCTCCCAGATC ATCGGCGAGCCGCTGCTCGTCAATGGTGTTGCAAAGGGGCGGGCGCTGGAAGAGCGGGTTTGTCACTTGATGGAGCAGGT TGGCCTCGATCCGAGGGCACGCGAACGCTACCCGCACGCCTTCTCCGGCGGCCAGCGCCAGCGCATCGGCATTGCCCGCG CCATCACGCTTAATCCGCGCGTCATCGTTGCCGATGAGGCGACCTCGGCGCTCGACGTTTCCGTGCGCTCGCAGGTGCTC GACCTGTTGATGCGTCTGCAGGACGAACTCGGGCTTGCCTATATCTTCATCAGTCATGATATCGGCGTTATCCGCTACAT GTGCGACCGTGTGGGCGTCATGTACAAAGGCCAGCTCGTCGAAATCGGCGACGCGGAGAAGGTCTGCCGCACACCCGAGC ACGCCTATACGCAGGCGCTCATATCGGCGATTCCGCGCCCTGATCCGCGTGATCGCGATCAATCGCGGCGCTTCCGCTAC GTCGCGCCGGACATTTTGAAGAATGGGAGTTTTCAGCGATGA Protein sequence : MTDILPIAGRPLLQVKNLTVEFPLRTGVFRAVSDLSFSIEPGKTLCVVGESGSGKSVTARSILQIVDAPGRISGGSIMLN DQNGGSIDLTSLNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHTVGNQIVEALRLHTRMSKAEARAEAISLLSQVEIPSPE KALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLIARLQKAKGMAVLFITHDMGVVAQIADDV LVMHNGVAKEYAPVEQIFHAPKDDYTRMLIGSVLKLEAKAEIRLARPPLDTTAPPILELRNVSMDFGEVKALDDVSISLL PGETLGIVGESGSGKTTMGRSIMRLIDPTAGEILYRRADGDIIDLATAKGQTLAAARRELRMVFQDPFGSLNPRMTVSQI IGEPLLVNGVAKGRALEERVCHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAITLNPRVIVADEATSALDVSVRSQVL DLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVMYKGQLVEIGDAEKVCRTPEHAYTQALISAIPRPDPRDRDQSRRFRY VAPDILKNGSFQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-82 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-82 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-82 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-82 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-95 | 41 |
