Gene Information

Name : pRL120755 (pRL120755)
Accession : YP_765258.1
Strain :
Genome accession: NC_008378
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 821155 - 822096 bp
Length : 942 bp
Strand : +
Note : similarity:fasta; SWALL:OPCA_BACSU (SWALL:O34992); Bacillus subtilis; glycine betaine/carnitine/choline transport ATP-binding protein OpucA; opucA; length 380 aa; id=48.4; ungapped id=50.16; E()=3.1e-49; 314 aa overlap; query 1-312 aa; subject 1-305 aa; s

DNA sequence : 
ATGATTCATCTCGACCATGTTACGAAGAATTATGACGGAAGCGGCCAGCATGCGGTCGACAATCTCGATCTCCTGATCGA
GACCGGTACGACGGTTGCCCTGATCGGTCCTTCGGGCTGCGGCAAGACCACGACCATGCGCATGATCAATCAATTGGAAA
CACCCACGGCGGGGCGTGTGCTGGTCGATGGCAGAGATATCGCCCGGGTCGATCAGAAAGAACTGCGCCGCAGCATAGGT
TATGTCATCCAGCAAGTTGGTCTGTTTCCGCATATGTCGATCGCGCGCAATGTCGCGACCGTGCCGCGGCTTCTCGGTTG
GGAAAAGGCGCGCAGCGATCGCCGGGTCGACGAGCTGCTGGATCTCGTGGGTCTTGATCCGGCCATCATGCGGCAGCGCC
TGCCACACGAGTTGTCGGGCGGACAGCGTCAGCGCGTCGGTTTCGCGCGTGCGCTCGCCGCCGACCCTGCCATCATGCTG
ATGGACGAACCGTTCGGCGCGATCGATCCGATCACCCGCGTTCGGCTTCAGGACGAATTCCGCGATATTCTCAGGAAGGT
GAAGAAGACCGTCGTCATCGTCACCCATGACCTCGATGAGGCAATCAAGATGGGCGATCGCATCGCCATCATGCGGGATG
GCCGCCTCCTTCAATATGATACCCCGCAGGAAATCCTCGCGCGTCCCGTCAATGAATTCGTCGAGAGTTTCCTCGGTCCT
GACCGGGCCATAAAAAGGCTGAGCTTGATTGTCGTATCGATGATCATGACCGCGCCGGAACCGTCGAACGGCGATGCCGA
GATCGCCGCTGACGCCACGGTTCACGACGCCTTGGCGCTCATTCTTTCCGGGGAGATGCCGGGCCTGCACGTCAGAGCCG
CTGACGGGACGCTTGCGGGATATTTGTCTCGTGACACTCTATTGCGCGCCAATCGGCTGTAG

Protein sequence : 
MIHLDHVTKNYDGSGQHAVDNLDLLIETGTTVALIGPSGCGKTTTMRMINQLETPTAGRVLVDGRDIARVDQKELRRSIG
YVIQQVGLFPHMSIARNVATVPRLLGWEKARSDRRVDELLDLVGLDPAIMRQRLPHELSGGQRQRVGFARALAADPAIML
MDEPFGAIDPITRVRLQDEFRDILRKVKKTVVIVTHDLDEAIKMGDRIAIMRDGRLLQYDTPQEILARPVNEFVESFLGP
DRAIKRLSLIVVSMIMTAPEPSNGDAEIAADATVHDALALILSGEMPGLHVRAADGTLAGYLSRDTLLRANRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-55 51
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-55 51