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Name : gabD (pRL120603) Accession : YP_765109.1 Strain : Genome accession: NC_008378 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 654276 - 655763 bp Length : 1488 bp Strand : + Note : similarity:fasta; SWALL:GABD_ECOLI (SWALL:P25526); Escherichia coli; succinate-semialdehyde dehydrogenase [NADP+]; gabD; length 482 aa; id=50.31; ungapped id=50.74; E()=3.1e-86; 473 aa overlap; query 20-491 aa; subject 9-478 aa; similarity:fasta; SWALL:Q9 DNA sequence : ATGAACCTCAACCAGCATTCTCCGCATCCAGACCACGATTCCTTCGAGCTCAGCGCGTTCTCCCGCGGCCTCTATATTGG CGGCGCCTGGCGGCCTGCGGCGGGCGAGGCTCGGATCGAGGTGATCGACCCCTCGACCGAGGCGGTCATAACCGCCGTGC CGGATGCGACCCTTGCGGATGCGGCAGCGGCCGTGGAGGCTGCCGCACGCGCCGCGGAAAGCTGGCGCGAGACTCCGCCG AGAAAGCGTTCCGAGATCCTGCGCCGCTGCTTCGAACTTATGGTGGAGCGCTCCGAAACGATTGCCAGGCTCATTTCGCT CGAGAATGGGAAGGCGTTGCGCGACGCGCGCGGCGAGGTGGCCTATGCGGCGGAGTTCTTTCGGTGGAACGCCGAGGAGG CGGTGCGCATCTCTGGTGAGTTCGGCCTTGCCCCGGCCGGCGGAAACCGCATCGTCGTCGATTACCAGCCTATCGGCATC TGCGTTCTCATCACACCGTGGAATTTCCCGGCCGCGATGGCGACCCGCAAGATCGCTCCTGCCCTTGCCGCAGGCTGCAC CGTCATCCTGAAGCCGGCGAGCGAGACGCCGCTGACGGCCTATGCACTTGCGGCTCTCTACGAGGAGGCTGGCGTGCCGC CGGGCGTCGTGAACGTGATGACAACATCGACGCCAGGCCCCGTCATCGCCGCGATGCTGGCCGACCCGCGCGTGCGAAAA CTTTCCTTCACAGGCTCGACGGGCGTCGGCCGCACGCTTCTGGCGGAAGCGGCGAAAAATGTCATCTCCTGTTCCATGGA ACTCGGCGGAAACGCGCCGTTCATCGTTTTTGACGATGCGGACATTGACGCGGCGATCGAGGGTTTGATGGTCGCGAAAA TGCGCAATGCGGGTGAGGCCTGCACGGCTGCAAACCGCATTTATGTCCAGTCCGGTATCCACGATGCTTTCGCCGAAAAA TTTACCCGACGCATGGCTGCCCTCAACGTAGGCCCGGGTGCGGATACGGATACGGAATGCGGGCCGATGATCACGCGCAA GGCGGTGGAGAAGATCGAGCGCCTTGTTACCGACGCCATTTCGCGCGGCGCGCGCGCCCTCTGCGGCGGACGAACATTGG CAGACCGCGGCTTTTTTTATCCGCCGACGGTGCTTGTCGATGTTTCCCCGGCCTCCGACATGGGTTGCGAGGAGATTTTC GGTCCCGTCGCGCCGCTCTACCGTTTCGAGAGCGAGGCCGAGGTCATCGCTGCCGCCAACGATACGGAATATGGCCTCGC CGCCTACATCTATACCCGCGACATTGGCCGCGGCATGCGCGTCGCCTCCAAGGTCGAGGCCGGCATGATCGCGCTTAATC GTGGACTGGTCTCCGATCCCGCCGCTCCCTTTGGCGGTGTGAAACAGAGCGGCCTTGGACGTGAAGGAGGGCAGCATCAC GGTATCGCGGAGTTCATGGAAGCCAAGTACATTGCGACAAGTTTCTGA Protein sequence : MNLNQHSPHPDHDSFELSAFSRGLYIGGAWRPAAGEARIEVIDPSTEAVITAVPDATLADAAAAVEAAARAAESWRETPP RKRSEILRRCFELMVERSETIARLISLENGKALRDARGEVAYAAEFFRWNAEEAVRISGEFGLAPAGGNRIVVDYQPIGI CVLITPWNFPAAMATRKIAPALAAGCTVILKPASETPLTAYALAALYEEAGVPPGVVNVMTTSTPGPVIAAMLADPRVRK LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEACTAANRIYVQSGIHDAFAEK FTRRMAALNVGPGADTDTECGPMITRKAVEKIERLVTDAISRGARALCGGRTLADRGFFYPPTVLVDVSPASDMGCEEIF GPVAPLYRFESEAEVIAAANDTEYGLAAYIYTRDIGRGMRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH GIAEFMEAKYIATSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-104 | 53 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-93 | 45 |
