Gene Information

Name : pRL120546 (pRL120546)
Accession : YP_765051.1
Strain :
Genome accession: NC_008378
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/oxidoreductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 593699 - 594445 bp
Length : 747 bp
Strand : -
Note : similarity:fasta; SWALL:Q9RH22 (EMBL:AF088897); Zymomonas mobilis; oxidoreductase; length 248 aa; id=68.29; ungapped id=68.29; E()=2.7e-56; 246 aa overlap; query 1-246 aa; subject 1-246 aa

DNA sequence :
ATGTCCCAAGGAATTGAAAACAAAGTGGTCGTCATCACCGGGGCAAGCAGCGGGCTTGGCGAAGCCACCGCCCGTCACCT
TGCCGAGCGCGGCGCGTCCGTCGTCCTCGGCGCGCGGCGTAGCGAGCGCATCGCTGCGTTGGCTGAGGAACTGTCCGCCA
AGGGCTATAGAGCCAAGGCAGTCCAAACCGACGTGATGGATCAACATCAAGTCAAGACGCTCGTCGACACGGCCGTCAAG
GCGTTCGGTCGCATCGACGTGATGCTGAACAATGCCGGCCTGATGCCACTTGCGCCGCTCGAACGGCTCAAAGTTGACGA
GTGGGATCGCATGATCGACGTGAACATCAAAGGGGTGCTCTACGGCATCGCAGCAGCGCTTCCGCACATGAAGGCGCAGA
AGTCGGGGCACATCATCAACGTGTCCTCCGTCTACGGTCATGTGGTCGATCCGGGTGCCACCGTCTATTGCGCGACGAAA
TTCGCCGTGCGCGCCCTCTCGGAAGGGCTGCGGAAGGAAGTGAAGCCGTACAATATCCGCACCACGATCATTTCACCCGG
CGCAGTGAGTACCGAACTCCTCGAACACATCAGCGAAAAGGACATCCAGGCGGGCACCAAGGAGTTCGTCAGCAAGATCG
CCATCAGCGCGGACACGTTCGCCCGAACGGTCGCCTTCGCGGTGAACGAACCAGACGATGTCGACATCAACGAAATCCTG
TTCCGGCCGACGGCTCAACCTGTCTGA

Protein sequence :
MSQGIENKVVVITGASSGLGEATARHLAERGASVVLGARRSERIAALAEELSAKGYRAKAVQTDVMDQHQVKTLVDTAVK
AFGRIDVMLNNAGLMPLAPLERLKVDEWDRMIDVNIKGVLYGIAAALPHMKAQKSGHIINVSSVYGHVVDPGATVYCATK
FAVRALSEGLRKEVKPYNIRTTIISPGAVSTELLEHISEKDIQAGTKEFVSKIAISADTFARTVAFAVNEPDDVDINEIL
FRPTAQPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 4e-47 50
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 5e-47 47