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Name : gabD (pRL120044) Accession : YP_764561.1 Strain : Genome accession: NC_008378 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 43493 - 44989 bp Length : 1497 bp Strand : - Note : similarity:fasta; SWALL:GABD_ECOLI (SWALL:P25526); Escherichia coli; succinate-semialdehyde dehydrogenase [NADP+]; gabD; length 482 aa; id=52.19; ungapped id=52.19; E()=2.2e-95; 479 aa overlap; query 16-494 aa; subject 2-480 aa; similarity:fasta; SWALL:Q9 DNA sequence : ATGACCGCCGTTTTTGCCCGCCCCGCCTATCATGACGCGCTGTCGCGGCTCGCCGACCGTCATCTCCTGCGCGATCTGGC CTATGTCGGCGGCCGGTGGATCGCCGGCCAATCAGGGAAAAGTTTCGAGGTCACCGATCCTGCCTCTGCGGCGACGCTGG CCTGGGTTGCAAGCCTTGGCGCCGATGAGACGGCAGTCGCGATCAATGCTGCGTCGGAGGCTTGCGCCGCCTGGCGCGCA ATGCTGCCGCAGGGCCGCGCGGCGATCCTGCGCAAATGGTTTGAGCTGATGCTGGCGGCCAAGGAGGATCTGGCGCTGAT CATGACGCTCGAACAGGGCAAGCCGATCGCGGAATCGCGTGGCGAGATCGATTACGCCGCCTCCTTCGTTGAATGGTATG CCGAGGAGGGCAAGCGGCTGAACGCCGAAAGCGTCACCAGCCATCTGCCCGGCGCGGAAATGATCGTCAGGCGCGAGGCG CTCGGCGTCGTCGGCATCGTCACGCCCTGGAATTTCCCCTCCGCCATGCTCACCCGAAAGGTTGCCGCGGCCCTGGCCGC CGGCTGCACGGTCGTCGCCCACCCCTCCTCCGAAACGCCGCTTTCGGCACTGGCTCTTGCCGAGCTTGGCGAGCGCGCCG GCGTTCCCGCCGGCGTCTTCAACGTTGTCACCGGCCATGCTGCAACGATCGTCGGACGGATGTGTGCGGACACCCGCGTA CGCGCCATGAGCTTCACCGGCTCCACCGGGATCGGACGGCTGATCGCCGCCGAATGCGCGCCGACCCTGAAGCGGCTGGT GATGGAACTCGGCGGCCACGCCCCGCTGATCATCTTCGACGACGCCGATATCGAAAAGGCGGTCGAGATCGCCGTCAACG CCAAGTTTGCAACCTCCGGCCAGGATTGCCTCGCCGCCAATCGCATTTTCGTCCAGCGGCGCATCGCCGATGCCTTTACC AAGGCCTTCGCAGACCGCATTGCCGAACTGAAGGTTGGTGCAGGGCTGGAGGATGGCGCCGAGATCGGACCGCTGATGCA TGAACGCGCTGTCGCCAAAGTCGAGGAACAGGTCGCCGACGCGCTGGGACATGGCGCACGGCTCGTCACCGGCGGCAGGC GTCACAAGGCCGGCCGGCTTTTCTATGAGCCGACACTGCTGAGCGATGTGCCGGCGGATGCGCTGATCATGCGCGAGGAG ACTTTCGGGCCCGTGGCGGCCATTGCCGCCTTCGACACGGAAGACGAGGTTATCGCCCGCGCCAACGATACCGAATACGG CCTCGTCGCCTATATCGTCACGGAGAACGGCGCCCGCCAGATGCGCCTCGGCCGCGCACTGGAATACGGCATGGTGGCGG TCAACCGGGTGAAGATCACCGGCGCTCCCATTCCCTTCGGCGGCTGGAAGCAGTCGGGTCTCGGCCGCGAAGGTTCACGC CATGGGCTCGAGGCCTTCACCGAGCTCAAATATCTCTGCATCGATACGGCCGCCTGA Protein sequence : MTAVFARPAYHDALSRLADRHLLRDLAYVGGRWIAGQSGKSFEVTDPASAATLAWVASLGADETAVAINAASEACAAWRA MLPQGRAAILRKWFELMLAAKEDLALIMTLEQGKPIAESRGEIDYAASFVEWYAEEGKRLNAESVTSHLPGAEMIVRREA LGVVGIVTPWNFPSAMLTRKVAAALAAGCTVVAHPSSETPLSALALAELGERAGVPAGVFNVVTGHAATIVGRMCADTRV RAMSFTGSTGIGRLIAAECAPTLKRLVMELGGHAPLIIFDDADIEKAVEIAVNAKFATSGQDCLAANRIFVQRRIADAFT KAFADRIAELKVGAGLEDGAEIGPLMHERAVAKVEEQVADALGHGARLVTGGRRHKAGRLFYEPTLLSDVPADALIMREE TFGPVAAIAAFDTEDEVIARANDTEYGLVAYIVTENGARQMRLGRALEYGMVAVNRVKITGAPIPFGGWKQSGLGREGSR HGLEAFTELKYLCIDTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-106 | 53 |
