Gene Information

Name : pRL120314 (pRL120314)
Accession : YP_764824.1
Strain :
Genome accession: NC_008378
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis related protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : -
Position : 332801 - 334153 bp
Length : 1353 bp
Strand : -
Note : similarity:fasta; SWALL:IUCD_ECOLI (SWALL:P11295); Escherichia coli; L-lysine 6-monooxygenase; iucD; length 425 aa; id=39.24; ungapped id=39.8; E()=4.5e-59; 423 aa overlap; query 13-431 aa; subject 5-425 aa; similarity:fasta; SWALL:Q93JN4 (EMBL:AJ315451);

DNA sequence :
ATGACCGTCGCTTTTGCCCGCAGGGATGCCGAGCCGCTGGATATTGCCGGCATCGGCATCGGCCCCTCCAATCTGAGCCT
CGCCTGCCTGTTCGAGTCGGTGCCCGAGATCAGAAGCCGTTTCTTCGAGCGACGAGACTCGTTCGACTGGCATCCCGGCA
TGATGATGCCCGGCGTCGAGTTGCAATCGTCCTTTCTGAAAGACCTCGTCACCCCGGTCCTGCCGACCAGCCGCTGGTCA
TTCGTCTCCTATCTGGTTGCCCATAAGAGGCTCTACGCCTTCCTGAACGCCAATTATGAGGCCGTTCCCCGGCAGGAGTT
TGCACGTTATCTCGCCTGGGTGGCCAACGGGTTGGACGGCCTGCGCTTTGGCACGGAGATCCGTGACGTCGAGCATCGCG
ACGACCGCTTCTTCCTGCGGTTCGACAGCGGGCAGGAGGAGGCGCGAAACCTGGTGATCGGCACGGGATCTCCACCCTTC
GTGCCCGACTGGGCAAAACCGTTTCTGGGTGCTGATTGCTTTCACAACAGCGAGGCCAAATCGCGTCTCAGCGATCTCGG
CGTTGCCCGCATCGTCGTGGTCGGCGGCGGTCAAAGCGGCGGTGAGGTTGTCGAAGCCCTGCTTGCCGATCCCGGTTCCA
TGAAGGAGCTGACATGGATTAGCCGGCGTCACAATTTCGAGCCGATCAACGACACGCCGTTTTCGAACCAAGTCTTCTCA
CCAGAATACGTGCAGGCCTATCTGAAGCTCGGCAGCGAGCAGAAGCAAGCCGCTTTGAAGAACTCGATCCTGACCAGCGA
CGGCTTGTCGATTTCGACGATACACGCGATCTATCGCCGCCTCTATGCATTGCGCTATCTCGAACCGAGCACACTCAACG
CATCTCTGGCGCCAAATCGCGATGTGATTCAGATGGAGCGGAACGGCAATGCCTACCGGCTCATCGTCAGGAACCAATTC
GACGGTGGGATCGAGGTGCTTCATGCGGATGCGGTGGTTCTGGCAACCGGCTACCGGTTCCGGTTACCGGATGCTCTCGG
CTCACTGGGCGACAGGATAACGCTCGACAGAAACGGCTATCCGCTTCTCAATGACGACTACACGATGCAGTGGACGGGTC
CGAGGGCCAACCGGCTGTTTGCGCAGAATGCGGGGCGATACTCGCATGGTATCGCCGATTCTCAGCTCAGCCTCATGGCC
TGGCGCAGCGCAACCATCGTCAATACGCTTCTCGGCCGGCAGCATTTCAATGCAGAACCCGACAATGGGCAACTCGCCTG
GGCGACGGAGACCGCGTCCGCAATGCCTCATCAGCTCCGCGCCGGCTATTCGGACGGCATGCTATCGTCCTGA

Protein sequence :
MTVAFARRDAEPLDIAGIGIGPSNLSLACLFESVPEIRSRFFERRDSFDWHPGMMMPGVELQSSFLKDLVTPVLPTSRWS
FVSYLVAHKRLYAFLNANYEAVPRQEFARYLAWVANGLDGLRFGTEIRDVEHRDDRFFLRFDSGQEEARNLVIGTGSPPF
VPDWAKPFLGADCFHNSEAKSRLSDLGVARIVVVGGGQSGGEVVEALLADPGSMKELTWISRRHNFEPINDTPFSNQVFS
PEYVQAYLKLGSEQKQAALKNSILTSDGLSISTIHAIYRRLYALRYLEPSTLNASLAPNRDVIQMERNGNAYRLIVRNQF
DGGIEVLHADAVVLATGYRFRLPDALGSLGDRITLDRNGYPLLNDDYTMQWTGPRANRLFAQNAGRYSHGIADSQLSLMA
WRSATIVNTLLGRQHFNAEPDNGQLAWATETASAMPHQLRAGYSDGMLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAK71634.1 IucD Virulence SHI-3 Protein 7e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRL120314 YP_764824.1 siderophore biosynthesis related protein VFG1084 Protein 4e-70 41