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Name : pRL120171 (pRL120171) Accession : YP_764683.1 Strain : Genome accession: NC_008378 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 171523 - 172578 bp Length : 1056 bp Strand : - Note : similarity:fasta; SWALL:Q89Q89 (EMBL:AP005946); Bradyrhizobium japonicum; ABC transporter ATP-binding protein; length 379 aa; id=47.86; ungapped id=49.7; E()=9.7e-52; 351 aa overlap; query 4-342 aa; subject 24-373 aa DNA sequence : ATGACAGAGGTTAGCATTGAAAAGCTGACCAAGGACTACGGGCAGGGTCTCGCAGTCAACGGCATTTCCATCAAAATTGC CGAGGGTGAGTTCATCTCGCTGCTCGGCCCGTCCGGATGCGGCAAGACGACGACATTGAAGATGATCGCCGGGTTCGAGG ACGCGACCCATGGGGCGATCCGCTTCGACGGGCGCGATGTCGTGCATATGCCCGTCGAGAAACGCGATATCGGCATGGTG TTTCAGAACTATGCGCTTTTCCCGCATATGACGGTGGAAAAGAACCTCGCCTTCGGGCTGGAAATGCGCAGGATACCGAA GGGCGAGATCCGCACCCGCATATCCGAGGTTCTGGATATGGTGCAGCTTGCCGGCTATGCAGACCGTTATCCGCGCCAGC TTTCCGGCGGCCAGCAGCAGCGCGTGGCGCTGGCGCGTGCGCTCGTCATCGAACCTAAAATCCTGCTGCTCGACGAACCG CTCGCCAATCTCGATGCCAAGCTGCGCGAGGAGATGCGGATATTCATCCGCGACCTGCAGCGCCGCGTCGGAATTACGAC CGTCTACGTCACCCATGACCAGGCAGAAGCCATGACCATGTCCGACCGGGTGGTGGTGATGTTCAGCGGCCGTATCGCTC AGATTGGGACGCCCTCCGACATCTACGAGCGTCCGGCAAATCTGGAAGTGGCGGAATTCGTCGGTCAGGTGAATATCGTC CACGGCAAGGTCGGCAAGGCCGCTGGCCGCACTGTGGTCTCCACCGTGTTCGGTGAGGTCGAAGTTGCCGACGACTATGC CGACGATACCGAACTTGTTTTGGCGCTGCGCCCGGAAGCGGTCGAACTGCTGCCGATATCCTCCAAGGGGGCCGGCGTGC CCGCCAAAGTTCTGTCCAGCTATTATTCCGGTAGCCTCGTCGATTACCGGCTGCAGTTGGCGGACGGCGCGGTCGTCAAC GTCCAGACGTTTCCGCGGATACGATTCGCCGATGGCGAGGAGGTGCTGTTGCGTGCACCTTCAGACCGCTTCTGGCCGCT TGGATCCGCGGCATGA Protein sequence : MTEVSIEKLTKDYGQGLAVNGISIKIAEGEFISLLGPSGCGKTTTLKMIAGFEDATHGAIRFDGRDVVHMPVEKRDIGMV FQNYALFPHMTVEKNLAFGLEMRRIPKGEIRTRISEVLDMVQLAGYADRYPRQLSGGQQQRVALARALVIEPKILLLDEP LANLDAKLREEMRIFIRDLQRRVGITTVYVTHDQAEAMTMSDRVVVMFSGRIAQIGTPSDIYERPANLEVAEFVGQVNIV HGKVGKAAGRTVVSTVFGEVEVADDYADDTELVLALRPEAVELLPISSKGAGVPAKVLSSYYSGSLVDYRLQLADGAVVN VQTFPRIRFADGEEVLLRAPSDRFWPLGSAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-33 | 42 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-33 | 42 |
