Gene Information

Name : kdsD (FTH_1396)
Accession : YP_763857.1
Strain : Francisella tularensis OSU18
Genome accession: NC_008369
Putative virulence/resistance : Virulence
Product : arabinose-5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 1367438 - 1368421 bp
Length : 984 bp
Strand : +
Note : arabinose phosphate isomerase

DNA sequence :
TTGGAGATTAGCATGACCAGCCATATTAACAATGCTGTTGAAACATTTCGCTTAGAGATAGAAACGTTAGAAAAATTAAA
AAATTCTATAGATGAGAATTTCGAAAAAGCATGTGAGATTATTCTAGAAAATAATCGTGATAAAAGTCGAGTAATAATAA
CCGGTATGGGAAAATCTGGTCATATCGGTAAAAAAATGGCTGCAACATTCGCTAGTACTGGGACGCCTGCTTTTTTTGTA
CACCCAGGTGAGGCTGGACACGGTGATTTTGGCATGATTACTAAAAATGATGTATTAATAGCTATTTCAAACTCTGGGAC
ATCATCTGAGATCATGGGATTACTGCCAATGATAAAACACCTTGATATTCCAATAATTGCTATTACTAGTAATCCAAAAT
CAATACTTGCTAGAAATAGTAATGTCACTCTTAATCTACATGTTGACAAAGAAGCATGCCCGCTAAATCTTGCCCCGACA
TCAAGCACTACAGCAACTTTAGTTTTAGGAGACGCTTTGGCAATTGCATTACTTAAGGCAAAAAACTTCTCTGAAAAAGA
TTTTGCTTTTTCACACCCTAATGGTGCCCTAGGTAGAAAACTAATTTTAAAAGTTGAAAATATAATGCGTAAAGGTAATG
AGATACCAATAGTTAAACCAACCGATAATATCCGTAAAGCAATATTAGAAATCAGCGATAAAGGTGTTGGAAATACCTTA
GTCGCTGAAAATAATACGCTTTTAGGTATTTTTACTGATGGTGACCTAAGAAGAATGTTTGAAGCAGAGAGTTTCAATTC
TCAGCGAGCTATCTCAGAAGTAATGACAAAAAACCCTAAAAGTATCTCAAAAGAAGAAATGGCAATAACAGCTCTTGAAA
AAATGGAAAAATATGAAATCACAAGTCTAGCAGTAGTCGACAATGGCCATAATATACTAGGTATAGTAACAATGCATGAT
CTTATCAAACTTGAACTTAGATAA

Protein sequence :
MEISMTSHINNAVETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFASTGTPAFFV
HPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPT
SSTTATLVLGDALAIALLKAKNFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTL
VAENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNGHNILGIVTMHD
LIKLELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 5e-57 43
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-57 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-57 43