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Name : clpB (HNE_0631) Accession : YP_759360.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 631509 - 634127 bp Length : 2619 bp Strand : + Note : identified by similarity to SP:P03815; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724 DNA sequence : ATGAACCTTGAGCAATACACAGAACGCGCCCGCGCTATCATCCAGGGCGCCCAGACCGCAGCCCTGGCCGCTGGCCATCA GGTGCTGACCCCGGCGCATATCCTCAAAACGCTGCTGGACGACCGCGACCAGCTGGCTGTGAACCTCATCCGCGCGACCG GTGGACGGCCTGAACTGGCCGTGCAGGGCGTTGACGCCGCGCTCGGCCGCGTGCCGAAAGTTTCCGGCGCCGGGGCAGGC GGGCTGCGCCTCGAACAGGCGGGCGCCAAACTCTTCCAGGACGCTGAAGCCGGCGCCAAGAAGGCCGGCGACGCCTTCGT CACCGCTGAGCGGCTGCTGCTTGCCATTGCCGGGCTGTCCGGAGATCCGGCGGCGGACGTGCTGAAGAACGCCGGCGTGA CGCCCAAGACGCTGGAAGGCGCTATTGCACAGCTGCGCCAGGGCCGCACGGCCGACAGTCAGAATGCGGAAGAAGGCTAT GAAGCCCTCAAGAAATACGCCCGCGACCTGACCAAGGACGCGCGCGAAGGCAAGCTCGACCCCGTGATCGGCCGTGACGA GGAAATCCGCCGCGCCATCCAGGTCCTCTCGCGCCGTTCAAAAAACAACCCCGTGCTGATCGGGGAGCCGGGCGTGGGCA AGACGGCGATTGCCGAAGGTCTCGCCCTGCGCATCGTCAATGGCGACGTGCCAGAAAGCCTCAAAGACAAGAAACTCCTC GCGCTCGATATGGGCGCGCTGATCGCCGGGGCAAAATTCCGCGGCGAGTTCGAGGAGCGCCTGAAAGCGGTGTTGAACGA AGTTCAGCAGGCAGACGGCGGCATCATCCTCTTCATTGACGAGATGCACACGCTCGTCGGCGCGGGAAAATCCGAAGGCG CGATGGACGCGTCCAATCTTCTGAAGCCCGCACTGGCGCGCGGGGAGCTGCACTGTATCGGCGCCACCACGCTGGACGAA TACCGCAAATATGTCGAAGGCGACGCGGCGCTGGCCCGTCGCTTCATGGCGGTATTTGTCGATGAGCCTACGGTGGAGGA CACGATCTCGATCCTCCGGGGGCTGAAGGGCCGTTACGAAGCCCATCACGGCGTGCGAATTTCCGATGCGGCGATTGTGG CCGCCGCTACGCTGTCCAACCGCTATATCACCGATCGTTTCCTGCCCGACAAAGCCATCGACCTGATGGACGAGGCCGGA TCGCGCCTGCGCATGCAGGTCGATTCCAAGCCCGAGGAGCTCGACGAGATCGACCGGCGGATGCTGCAGCTGAAAATCGA GGCCGAAGCTCTCAAGAAGGAGAAGGACACCGCCTCGCAGGACCGTCTGAAAACGCTGGAAGGCGAAATCGCCGGTCTTG AAACCCGCTCACGCGAGCTGACCACCGCCTGGAGCGCCGAGAAGGACAAGCTGAAAGGCGCAGCCTCCGCTAAGGAGAAG CTCGACCGGGCCTTCTCGGATATGGCTGAGGCCCAGCGCCAGGGCGATCTGGCCCGTGCGTCCGAGCTTAAATTCGCGAC CATCCCGCAGCTTGAAAAACTGATCGCCGAAGTCGAAGCCAAGGGCGACGCCGAAGGCGGGCTCGTTTCCGAAGTCGTCC GTCCAGAGGATATTGCCGGGGTCGTTTCCAAATGGACCGGCATTCCGGTCGACAAGATGATGGAAGGCGAGCGGGAGAAG CTGCTGCGCATGGAAGATTCCCTGCGCGGGCGGGTTGTTGGCCAGGAAGACGCGCTGCTCGCGGTCTCCAATGCCGTGCG CCGCGCGCGCGCCGGTCTGCAGGACCCGAACCGCCCCATCGGCTCGTTCCTGTTTGTCGGCCCCACGGGTGTTGGCAAGA CAGAGCTCACCAAGGCGCTCGCCGAATTCATGTTCGATGATGACACCGCGATCCTGCGGCTCGATATGTCGGAATTTTCC GAGAAGCATTCGGTTGCCCGCCTGATCGGCGCGCCGCCGGGCTATGTCGGCTATGATGAAGGCGGGGTTTTGACCGAATC CGTCCGCAGGCGGCCTTATCAGGTCGTGCTGTTTGACGAGGTGGAGAAAGCCCACCCGGACCTCTTCAACACGCTGCTCC AGGTGCTCGATGATGGCCGTCTCACCGATGGCCAGGGCCGCACGGTGGATTTCAAGAACACGATCATCATCATGACCTCA AACCTCGGCGCCGACGCGCTGGCGAGCGGGGAAGAGGGGGAGGTGTCCGAGCAGGCCCGCGAGCATGTGATGGGCGCCAT CCGCCGGCATTTCCGCCCGGAATTCATCAACCGGATCGACGAGATCGTCTTCTTCAAACGGCTTGGCCGCGGCGAGATCG ACCATATCGTCGACATCCAGATGGGCCGCCTCGAGCAGCTTCTGAAGGACCGGAAGATGAAGCTCGACCTCAGCCTCGAC GCCCGCAACTGGCTCGCGGCGCGGGGATACGATCCGGTCTATGGCGCGCGCCCCTTGAAGCGTGTCATCCAGAAAGAGCT GCAGGACCCGCTCGCCCGGCTGCTGCTCGAAGGCCGCATCCTTGACGGCGAAACCATCCATGTCGGCGTGGAGGGCGATG GCCTCGCCATCAACGGCGTGCCCAACGACTTTGCCAAAGGCCGGGCTGCGCTCAACTGA Protein sequence : MNLEQYTERARAIIQGAQTAALAAGHQVLTPAHILKTLLDDRDQLAVNLIRATGGRPELAVQGVDAALGRVPKVSGAGAG GLRLEQAGAKLFQDAEAGAKKAGDAFVTAERLLLAIAGLSGDPAADVLKNAGVTPKTLEGAIAQLRQGRTADSQNAEEGY EALKKYARDLTKDAREGKLDPVIGRDEEIRRAIQVLSRRSKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLL ALDMGALIAGAKFRGEFEERLKAVLNEVQQADGGIILFIDEMHTLVGAGKSEGAMDASNLLKPALARGELHCIGATTLDE YRKYVEGDAALARRFMAVFVDEPTVEDTISILRGLKGRYEAHHGVRISDAAIVAAATLSNRYITDRFLPDKAIDLMDEAG SRLRMQVDSKPEELDEIDRRMLQLKIEAEALKKEKDTASQDRLKTLEGEIAGLETRSRELTTAWSAEKDKLKGAASAKEK LDRAFSDMAEAQRQGDLARASELKFATIPQLEKLIAEVEAKGDAEGGLVSEVVRPEDIAGVVSKWTGIPVDKMMEGEREK LLRMEDSLRGRVVGQEDALLAVSNAVRRARAGLQDPNRPIGSFLFVGPTGVGKTELTKALAEFMFDDDTAILRLDMSEFS EKHSVARLIGAPPGYVGYDEGGVLTESVRRRPYQVVLFDEVEKAHPDLFNTLLQVLDDGRLTDGQGRTVDFKNTIIIMTS NLGADALASGEEGEVSEQAREHVMGAIRRHFRPEFINRIDEIVFFKRLGRGEIDHIVDIQMGRLEQLLKDRKMKLDLSLD ARNWLAARGYDPVYGARPLKRVIQKELQDPLARLLLEGRILDGETIHVGVEGDGLAINGVPNDFAKGRAALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_759360.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 3e-120 | 42 |
| clpB | YP_759360.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 2e-109 | 42 |
