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Name : tetA (HNE_0492) Accession : YP_759222.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Resistance Product : tetracycline-efflux transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 484964 - 486217 bp Length : 1254 bp Strand : - Note : identified by similarity to SP:P02981; match to protein family HMM PF00083; match to protein family HMM PF07690 DNA sequence : ATGACCGACACCGCGCCCGCCCGCCTTCCCGGCAAAAACGCTTTCTTCTTCGTGCTGGTGACGGTCTTCATCGATCACCT CGCCTTTGGCCTGATCATCCCGGTCCTGCCCACGCTGATCCAGGATCTCGCCAACGTGCCCGCCTCCGGCGCCACCCTCT GGATCGGCGGTCTCGCGGCCACCTATGCCGTGATGACGTTCCTGTTCGGCCCGCTGATCGGCGCCCTGTCCGACAAGTTC GGCCGCCGCCCGGTCCTGCTCGTCTCGATGGCGATGCTGGGGCTCGACTTTCTGCTGATGGCGCTGGCCCCCAACATCTG GATACTCTTCCTCGGCCGCGCGCTCGCGGGCATATCGGGCGCCACCTACTCAACCGCCAACGCCTACATTGCCGATACGA CGACCCCGGAGGAACGCGGCCGCGCCTTCGGCTTTATCGGCGCCTCCTTCGGCCTCGGCTTCATTTTCGGCCCGGTGATC GGCGGCCTGCTCGGCGAGCTTGGCCCCCGCATACCCTTCTTTGCCGCCGTGGGCCTCGCCTTCCTCAACTTCCTCTACGG CGTATTCGTGCTGCCCGAATCCCTCCCCAAGGCGCGCCGCCGCAATCTGAACCTTAAGCGCGCCAACCCCCTCGGCGCCG CCCGCCACTTCTCAAAGCTCCCCAAAGTCTCCTGGTTCCTCATCGCGAGCGGCATTTTCTTCCTCGCCCACACAGTCTTC CCTGCCACCTGGTCGGTGCATGGCGAGATCCGGTATGACTGGTCGCCCATGCAGATCGGCCTCTCGCTCGGCCTCGTGGG CGTCGGTGCCGCCACCGTCCAAGCGGGCCTCATGGGCTTTATCCTCAAACGCCTCGGCAGTGTGCGCACCATCATGTTCG GCTATTGCGTCACCATCATCGCGATGACCGGCTTTGCCTTTGCGGGCCAGCCGCTCTTTGCCTATCTCATCATCCCGTTC AGCGCGCTCGGCGGCGTCACCATGCCCGCCGCCAACGCCCTGATGTCCAGCCTCACTCCGCCTGACGCGCAGGGCGAGCT GCAAGGCGCTGCCTCCAGCCTCAATGCGCTGGGCATGATCATCGGCCCCCTGATCATGAGCGGTGCATTGTTCAGCTTCT CCCGCGAAGACGCGCCTTTGCAATTTGGCGGCGCAGCATTCCTGCTCGCGGCCATTCTCACTGCGCTGGCGTTTCTGCCC TTCCTGCGCGGGGTCGCCGCCAACCGAGACGTTCTGCCCGCCGCAGCGCCCTGA Protein sequence : MTDTAPARLPGKNAFFFVLVTVFIDHLAFGLIIPVLPTLIQDLANVPASGATLWIGGLAATYAVMTFLFGPLIGALSDKF GRRPVLLVSMAMLGLDFLLMALAPNIWILFLGRALAGISGATYSTANAYIADTTTPEERGRAFGFIGASFGLGFIFGPVI GGLLGELGPRIPFFAAVGLAFLNFLYGVFVLPESLPKARRRNLNLKRANPLGAARHFSKLPKVSWFLIASGIFFLAHTVF PATWSVHGEIRYDWSPMQIGLSLGLVGVGAATVQAGLMGFILKRLGSVRTIMFGYCVTIIAMTGFAFAGQPLFAYLIIPF SALGGVTMPAANALMSSLTPPDAQGELQGAASSLNALGMIIGPLIMSGALFSFSREDAPLQFGGAAFLLAAILTALAFLP FLRGVAANRDVLPAAAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 3e-42 | 41 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 2e-42 | 41 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 2e-42 | 41 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 2e-42 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 2e-42 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 1e-42 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetA | YP_759222.1 | tetracycline-efflux transporter | NC_011586.7045189.p0 | Protein | 3e-39 | 41 |
| tetA | YP_759222.1 | tetracycline-efflux transporter | NC_010410.6002597.p0 | Protein | 9e-43 | 41 |
| tetA | YP_759222.1 | tetracycline-efflux transporter | CP001485.1.gene2821. | Protein | 9e-43 | 41 |
| tetA | YP_759222.1 | tetracycline-efflux transporter | AF534183.gene.p01 | Protein | 8e-43 | 41 |
