Gene Information

Name : HNE_3074 (HNE_3074)
Accession : YP_761750.1
Strain : Hyphomonas neptunium ATCC 15444
Genome accession: NC_008358
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3251007 - 3251234 bp
Length : 228 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGGCGAAAGCACCGCCCATCACCAACCGTATCCGGGAGCTGCGCGAATCTCATGGCGCGATGAGTCAGGCAGCTCTGGC
TGAAGCCATCGGCGTCACCCGGCAGACGGTGATTGCCATAGAGCTGGGAAAATATTCGCCGTCCTTGGAAAGCGCCTTCC
GCATCGCGCGGGTCTTTGACCTTGGAATTGAAGACGTTTTCGGCTGGCAACCGCCACCGCTCTCGTGA

Protein sequence :
MAKAPPITNRIRELRESHGAMSQAALAEAIGVTRQTVIAIELGKYSPSLESAFRIARVFDLGIEDVFGWQPPPLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0086 NP_938485.1 regulatory protein Not tested Not named Protein 5e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-07 45
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-07 45
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-09 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HNE_3074 YP_761750.1 DNA-binding protein VFG2168 Protein 6e-08 45
HNE_3074 YP_761750.1 DNA-binding protein VFG2175 Protein 6e-08 45