Gene Information

Name : ssb (HNE_2764)
Accession : YP_761443.1
Strain : Hyphomonas neptunium ATCC 15444
Genome accession: NC_008358
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2924846 - 2925337 bp
Length : 492 bp
Strand : -
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGGCGGGATCGGTAAACAAGGTCATTCTGGTGGGCAATCTCGGGGCTGACCCCGAAGTGAAGCAGTTCCAGAATGGCGG
GCAGGTCTGCAACCTGCGCATCGCAACCTCGGAAACCTGGCGCGACAAGGCGTCGGGCGAGCGCAAGGAGCGCACCGAAT
GGCACACCGTGGCCATCTTTTCCGAAGGCCTGGTCAAGGTTGCCCAGAGTTATCTGAAAAAGGGCTCCAAGGTTTATCTT
GAGGGCAAGCTGCAGACCCGCAAATGGCAGGACAAGGACGGCAACGACCGGTACACGACCGAGATTGTCCTGCAGGGCTT
TGATGCCACGCTGGTGATGCTCGACGGTCGCGGCGAAGGCGGCGGCGCCAGTGCCGGCGGCGGTGGCCGTGACATGGGCT
ATTCGGGCGGCGGCAATGGCGGCGGACGCCAGCAGATGAGCGGCCCGAAAGAAAGCTTCAGCCAGGATCTCGACGACGAG
ATCCCGTTCTGA

Protein sequence :
MAGSVNKVILVGNLGADPEVKQFQNGGQVCNLRIATSETWRDKASGERKERTEWHTVAIFSEGLVKVAQSYLKKGSKVYL
EGKLQTRKWQDKDGNDRYTTEIVLQGFDATLVMLDGRGEGGGASAGGGGRDMGYSGGGNGGGRQQMSGPKESFSQDLDDE
IPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-27 48
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 4e-27 48
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 4e-27 48